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Information for Bu.ce.I1-1 intron  (Format of information for each intron) 

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

                                                       gtgcg cccagcatgg
13621 gcgcactcct gcgggtgcaa gtcccgccat aagctggtca cagcgaatga agtgaagcgc
13681 aactgcatga gggcgaccga atgtggagag gaagcgtgga gcgtaaatcg tgagccgatg
13741 gacaagaact gcatagaagg cgctgccgtg cagggcgagc gggcaacgca ccgcgaagct
13801 ctcgtgacca aggcgaagca gcgtaaatgc ggcggttgtg cgatgaagga gtgcgctctt
13861 acctggggag atctcgcctt atgcctgaaa gggcgacggc gtcgagccgg agcgagaagt
13921 cagcagaggt cgtagtagtc acaggacagg tcgatgaggc tgaagctggt gacgaagggc
13981 cgaacgggaa ggagtgtcca gcgtcatgtc gatgcgacag gcaatgcgtc agatgcccgt
14041 gcgagcgggg cgagcgggaa gcatacgcgg tgaagctgcg tctatgcccg tgagcgacga
14101 aggctgttgc ccgcgccatg aatccgggga cacagggtca ccgctgctga tggcggcgct
14161 gacgagggag aacctgaagc aggcgttcaa acgggtacgg gccaacaagg gagccgctgg
14221 cgtggacggt ctggatattg accagacgtc gcgccatctg gtgacggcgt ggcccgcgat
14281 ccgtgaacag ttgctgaaga ggacgtaccg gcccagtccg gtacggcggg tgacgattcc
14341 gaaaccggac ggaggcgagc gcgagcttgg catcccgacg gtgacggacc ggctgatcca
14401 gcaggcgctg ctgcaggtgc tgcaaccggt tctggaccct ggcttcagcg agcacagcta
14461 cggcttccgg cctggacggc gtgcgcacga tgcggtgctt gccgcgcagt cgtacgtgca
14521 gtcgggtcgg cgaatcgtgg tggatgttga tctggagaag ttcttcgacc gggtcaacca
14581 cgacatcctg atcgaccgac tgcagaaacg tattggggac gccagcgtga tctggctgat
14641 ccgggcgtat ctgaacagcg gcatcatgga tggcggcgtg gttcagcagc gcgaacaggg
14701 cacgccacag ggcgggccgc tatcgccgtt gctggccaac gtgttgctcg atgaggtgga
14761 caaggaactg gagcggcgag gccactgctt cgcgcgctat gccgacgatg cgaatgtcta
14821 tgttcgtagc cgccgtgctg gcgagcgggt gatggcgctg ctgcgtcgtc tgtatgggca
14881 actgcggttg aaggtcaacg agaccaaaag cgcagtcgcc agtgtgttcg gtcgcaagtt
14941 tctgggctac agcctatggg tagcgtccgg cggtgtcatc aagcgcaagg tggcggccag
15001 atcgctgctg gcgttcaaac gccgcattcg tgaactgacc ggccgtagcg gcgggcgcag
15061 catgaaggac gtggtggaac ggttacggcc ttatgtattg ggctggaagg cgtacttccg
15121 gatggcgcag acgccacgag tctggctgga tctggacaag tggatgcgtc accggctgcg
15181 tgtcatccag ctcaaacact ggcgccgcgg tccgaccatc taccgggaac tgcgtgcgct
15241 gggcgcaccg tccgctgtgg cgcaacaggt ggcggcgaac agctgtcgct ggtggcgtaa
15301 tagcggcaag ctcctgaata gcgtattgac cctcgcgtac ttcgaccggc tgggtgtgcc
15361 ccgactctca taacctcaac ttcccgaacc gcccggtgcg gacccgcatg ccgggtggtg
15421 tggcaggggt acggcctcat ggtcgtcccc tatgccgat

3' end

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[Intron and flanking sequence]

13261 cggtgcgatc gtgtcgttcg agctgaaggg cgacacgccc gagcagcagc gcgcgaacgc
13321 atggcgcgtg atcgacggca cgaagctggt gtcgatcacc ggcaacctcg gcgacacgcg
13381 tacgacgatc acgcatccgg ccaccacgac gcacggccgg attacgccgg aagcgcgtgc
13441 ggcggcgggg atcaccgaag ggttgatccg cctcgcggtc ggcctggagc atgcgggcga
13501 cattcgcaac gatctggcgc gtggtctgga cggctgagcg agatagcact ttttggctgg
13561 gcatcaatga aaacgggccg ctcgaaagag cggcccgttg tcgttgtgcg cccagcatgg
13621 gcgcactcct gcgggtgcaa gtcccgccat aagctggtca cagcgaatga agtgaagcgc
13681 aactgcatga gggcgaccga atgtggagag gaagcgtgga gcgtaaatcg tgagccgatg
13741 gacaagaact gcatagaagg cgctgccgtg cagggcgagc gggcaacgca ccgcgaagct
13801 ctcgtgacca aggcgaagca gcgtaaatgc ggcggttgtg cgatgaagga gtgcgctctt
13861 acctggggag atctcgcctt atgcctgaaa gggcgacggc gtcgagccgg agcgagaagt
13921 cagcagaggt cgtagtagtc acaggacagg tcgatgaggc tgaagctggt gacgaagggc
13981 cgaacgggaa ggagtgtcca gcgtcatgtc gatgcgacag gcaatgcgtc agatgcccgt
14041 gcgagcgggg cgagcgggaa gcatacgcgg tgaagctgcg tctatgcccg tgagcgacga
14101 aggctgttgc ccgcgccatg aatccgggga cacagggtca ccgctgctga tggcggcgct
14161 gacgagggag aacctgaagc aggcgttcaa acgggtacgg gccaacaagg gagccgctgg
14221 cgtggacggt ctggatattg accagacgtc gcgccatctg gtgacggcgt ggcccgcgat
14281 ccgtgaacag ttgctgaaga ggacgtaccg gcccagtccg gtacggcggg tgacgattcc
14341 gaaaccggac ggaggcgagc gcgagcttgg catcccgacg gtgacggacc ggctgatcca
14401 gcaggcgctg ctgcaggtgc tgcaaccggt tctggaccct ggcttcagcg agcacagcta
14461 cggcttccgg cctggacggc gtgcgcacga tgcggtgctt gccgcgcagt cgtacgtgca
14521 gtcgggtcgg cgaatcgtgg tggatgttga tctggagaag ttcttcgacc gggtcaacca
14581 cgacatcctg atcgaccgac tgcagaaacg tattggggac gccagcgtga tctggctgat
14641 ccgggcgtat ctgaacagcg gcatcatgga tggcggcgtg gttcagcagc gcgaacaggg
14701 cacgccacag ggcgggccgc tatcgccgtt gctggccaac gtgttgctcg atgaggtgga
14761 caaggaactg gagcggcgag gccactgctt cgcgcgctat gccgacgatg cgaatgtcta
14821 tgttcgtagc cgccgtgctg gcgagcgggt gatggcgctg ctgcgtcgtc tgtatgggca
14881 actgcggttg aaggtcaacg agaccaaaag cgcagtcgcc agtgtgttcg gtcgcaagtt
14941 tctgggctac agcctatggg tagcgtccgg cggtgtcatc aagcgcaagg tggcggccag
15001 atcgctgctg gcgttcaaac gccgcattcg tgaactgacc ggccgtagcg gcgggcgcag
15061 catgaaggac gtggtggaac ggttacggcc ttatgtattg ggctggaagg cgtacttccg
15121 gatggcgcag acgccacgag tctggctgga tctggacaag tggatgcgtc accggctgcg
15181 tgtcatccag ctcaaacact ggcgccgcgg tccgaccatc taccgggaac tgcgtgcgct
15241 gggcgcaccg tccgctgtgg cgcaacaggt ggcggcgaac agctgtcgct ggtggcgtaa
15301 tagcggcaag ctcctgaata gcgtattgac cctcgcgtac ttcgaccggc tgggtgtgcc
15361 ccgactctca taacctcaac ttcccgaacc gcccggtgcg gacccgcatg ccgggtggtg
15421 tggcaggggt acggcctcat ggtcgtcccc tatgccgatt cggcgtatgc cgtcgcgtgc
15481 gtttcgccaa cgttcagcca gcggtgtgcc cgggcggtgc ggcacgcatc gcgtccacca
15541 tccagcgcag cgtttcgtcg agcggcgtga ccggcaattc gcccaccgcg cgccgcagct
15601 tgtcgcgcga cccgctcagg cttttcactt cgttgtgccg cacgaagcgc gggtcgatcg
15661 tcacgtcgat cacgtaaccg gcgatgcgcg acagcatcgc gagcacttcc ttcagcgaat
15721 acgcgcgctc cgagcagacg ttgaacgtct cgccggccgg cgcggcttcg atgagcttca
15781 aataggcggc cgtcacgtcg cgtacgtcgg agaaatcgcg gctcacgtcg aggttgccga

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[ORF sequence]

MPVSDEGCCPRHESGDTGSPLLMAALTRENLKQAFKRVRANKGAAGVDGLDIDQTSRH

LVTAWPAIREQLLKRTYRPSPVRRVTIPKPDGGERELGIPTVTDRLIQQALLQVLQPV

LDPGFSEHSYGFRPGRRAHDAVLAAQSYVQSGRRIVVDVDLEKFFDRVNHDILIDRLQ

KRIGDASVIWLIRAYLNSGIMDGGVVQQREQGTPQGGPLSPLLANVLLDEVDKELERR

GHCFARYADDANVYVRSRRAGERVMALLRRLYGQLRLKVNETKSAVASVFGRKFLGYS

LWVASGGVIKRKVAARSLLAFKRRIRELTGRSGGRSMKDVVERLRPYVLGWKAYFRMA

QTPRVWLDLDKWMRHRLRVIQLKHWRRGPTIYRELRALGAPSAVAQQVAANSCRWWRN

SGKLLNSVLTLAYFDRLGVPRLS

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[Secondary structure]

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| Introduction | Intron secondary structure | Intron ORF structure | Introns listed by organism | Bacterial intron fragments | Alignment of insertion sequence |

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