C.w.I1-1

Sequence from Genbank entry (intron is on the antisense strand).

The boundaries of the intron are marked as red and ORF is marked

as blue, with start and stop codons underlined.

Intron on antisense strand

3' end

attaggggt
6121 cgaagtggta gtcacctacc acgactccca ttccgaaccg tgcatgagac tttcacctca
6181 cacggctctc ggcaattagt cctttgtcat aggtactgtt aacacatcgt ctttccattc
6241 atagccattt tctaaccaat cgtagaggta gtcatttttg cttttgacat catgacagtg
6301 acgatgtaga gcttgaagat tgttgtaggt atcctttcca cctttcgatt tggggataat
6361 gtggtcaact tctatcaagt cttcaggtgt aaagtattgc ttacattgag gacatatacc
6421 tttttgtttc tttaagagtt ttgcgactct tgttggtgtc ccagaatatg tacctcgtct
6481 tttgctccag taagtccagt ttccgtcata gggtgaagct tcaggtttaa cccatgtgtg
6541 tctcaatatt cctgtttcgg cgtggtgata gaggactgct ccttttgttt ggaatgtcca
6601 gaatccgtgt tttccgtatg agaaatattt tttaagagct ttaatcaatg gtgtctcttt
6661 ctttttcctg cttactgtcc aagctctaag catattccat aatatgttgt cttcggattt
6721 gaatgttttc ttactgcaaa catttcggta gtaattacac catcctcgga ttatgggatt
6781 taatcttgtg attaatgctt tttgtggggc tttcttgttg gccttgatgg cctctttgat
6841 tgcctcatgg tgagctagta tttttttctt gcttggcttg attagtgttt tgaatccagt
6901 tagttgtgca ttttttccac ctgttttact agagtggtgt ttacccttgg ggtatgacct
6961 aatattgaat ccaaggaaat cgaagcctgg ttcaatggtt ttaccattat ggacaatact
7021 ttttagagtg tgtcttatgg aagtcttctc tggttttagt tccaatccga ctttttctaa
7081 ccattgtgca actagatttt tacattgtag aataacatcg taatctgtat gaagaattac
7141 gaaatcatcg gcgtagcgga tgattttggg tttatatccc tgtttaagac tgccatcttc
7201 tctccgtttt gtacggggga agtgattttc tatgtctatt atcattccgt gtagtgcaat
7261 gttagccaat aacggactta ttacaccacc ttgaggtgta cctgaatctg tttcctcaaa
7321 aatgcccttg tccattacac cgcattccaa ccattgttta atgattcttt tgatgttgtg
7381 tggacaatct actttggaca gtaggtaatc atggttaatc ttgtcgaagc atttggcgat
7441 atctgcatct agaacatatt ttgcattcgt ttttattgct aaaaatattc tactgatagc
7501 gtcttgtgcg cttctgcctg gacggaagcc ataagatgta ccctcaaatt gggcttccca
7561 gtatggttct aaggctgatt taactaaggc ttgcattgct ctatctttca tggtgggtat
7621 ccccagtcca cgtttttcat ctcttccagg tttaggtatc caaacccgtc tgagtgcctt
7681 ggctttgtaa ccttttaacc ttagttcgtt aactaacttt aatctttggt taggtcgtaa
7741 tgactttttc ccatcaactc cagcagtttt cttaccttgg ttgtcttggg tcactttgcg
7801 aatggctaag agctttgcgt aatgtgactt taacagtaac ttctgaagct ttttagcttt
7861 gactttatta cctgatttaa cagcttgaaa tattcttttt tgaagcttaa acactttcct
7921 ctggactttt gcccagttta tggtgttcca ttctggcgta gtcttggtta tactcgcatt
7981 cgacatttaa ctacctctaa tagagactat ttcttctaat taaccagcaa tacgtcagct
8041 tatccatatt cattacaaat aggcatttgc ttcttaattg cttctcacat ccatgaccct
8101 tgcgcttaag tttgtcacta cttacatcat cgacctgatg gtaagagcag tcatggactt
8161 aattcgttcc gttggtttgg gtgtattggt tttaggtttc atctctcccc caggttactt
8221 ttaggaatcg ttgtggatgt tacgaagaaa actccacttt tcaccttgtt cttttgaacg
8281 cagcctgtcg aacagatttg gctacttgga ggtcttgagg gttcaggacg atgattcagc
8341 gtaatgctta accgtgacca attgactgga ggaacgactt gccatgctgt ttcatgacgg
8401 gttccccttt taaccctgct tccatcctga gtttactaag tccaaaacgg agggttaagt
8461 tgtcactctt aggattgctc ccttgattcc gagtgtggct cctttagcca acaaaccaac
8521 agttatctag ttttctaggt tctagactag ctacacacct gtatttagta caggctttct
8581 agctaaacga atcgcac

5' end

Intron on sense strand

5' end

1 gtgcgattcg tttagctaga aagcctgtac taaatacagg tgtgtagcta gtctagaacc

61 tagaaaacta gataactgtt ggtttgttgg ctaaaggagc cacactcgga atcaagggag

121 caatcctaag agtgacaact taaccctccg ttttggactt agtaaactca ggatggaagc

181 agggttaaaa ggggaacccg tcatgaaaca gcatggcaag tcgttcctcc agtcaattgg

241 tcacggttaa gcattacgct gaatcatcgt cctgaaccct caagacctcc aagtagccaa

301 atctgttcga caggctgcgt tcaaaagaac aaggtgaaaa gtggagtttt cttcgtaaca

361 tccacaacga ttcctaaaag taacctgggg gagagatgaa acctaaaacc aatacaccca

421 aaccaacgga acgaattaag tccatgactg ctcttaccat caggtcgatg atgtaagtag

481 tgacaaactt aagcgcaagg gtcatggatg tgagaagcaa ttaagaagca aatgcctatt

541 tgtaatgaat atggataagc tgacgtattg ctggttaatt agaagaaata gtctctatta

601 gaggtagtta aatgtcgaat gcgagtataa ccaagactac gccagaatgg aacaccataa

661 actgggcaaa agtccagagg aaagtgttta agcttcaaaa aagaatattt caagctgtta

721 aatcaggtaa taaagtcaaa gctaaaaagc ttcagaagtt actgttaaag tcacattacg

781 caaagctctt agccattcgc aaagtgaccc aagacaacca aggtaagaaa actgctggag

841 ttgatgggaa aaagtcatta cgacctaacc aaagattaaa gttagttaac gaactaaggt

901 taaaaggtta caaagccaag gcactcagac gggtttggat acctaaacct ggaagagatg

961 aaaaacgtgg actggggata cccaccatga aagatagagc aatgcaagcc ttagttaaat

1021 cagccttaga accatactgg gaagcccaat ttgagggtac atcttatggc ttccgtccag

1081 gcagaagcgc acaagacgct atcagtagaa tatttttagc aataaaaacg aatgcaaaat

1141 atgttctaga tgcagatatc gccaaatgct tcgacaagat taaccatgat tacctactgt

1201 ccaaagtaga ttgtccacac aacatcaaaa gaatcattaa acaatggttg gaatgcggtg

1261 taatggacaa gggcattttt gaggaaacag attcaggtac acctcaaggt ggtgtaataa

1321 gtccgttatt ggctaacatt gcactacacg gaatgataat agacatagaa aatcacttcc

1381 cccgtacaaa acggagagaa gatggcagtc ttaaacaggg atataaaccc aaaatcatcc

1441 gctacgccga tgatttcgta attcttcata cagattacga tgttattcta caatgtaaaa

1501 atctagttgc acaatggtta gaaaaagtcg gattggaact aaaaccagag aagacttcca

1561 taagacacac tctaaaaagt attgtccata atggtaaaac cattgaacca ggcttcgatt

1621 tccttggatt caatattagg tcatacccca agggtaaaca ccactctagt aaaacaggtg

1681 gaaaaaatgc acaactaact ggattcaaaa cactaatcaa gccaagcaag aaaaaaatac

1741 tagctcacca tgaggcaatc aaagaggcca tcaaggccaa caagaaagcc ccacaaaaag

1801 cattaatcac aagattaaat cccataatcc gaggatggtg taattactac cgaaatgttt

1861 gcagtaagaa aacattcaaa tccgaagaca acatattatg gaatatgctt agagcttgga

1921 cagtaagcag gaaaaagaaa gagacaccat tgattaaagc tcttaaaaaa tatttctcat

1981 acggaaaaca cggattctgg acattccaaa caaaaggagc agtcctctat caccacgccg

2041 aaacaggaat attgagacac acatgggtta aacctgaagc ttcaccctat gacggaaact

2101 ggacttactg gagcaaaaga cgaggtacat attctgggac accaacaaga gtcgcaaaac

2161 tcttaaagaa acaaaaaggt atatgtcctc aatgtaagca atactttaca cctgaagact

2221 tgatagaagt tgaccacatt atccccaaat cgaaaggtgg aaaggatacc tacaacaatc

2281 ttcaagctct acatcgtcac tgtcatgatg tcaaaagcaa aaatgactac ctctacgatt

2341 ggttagaaaa tggctatgaa tggaaagacg atgtgttaac agtacctatg acaaaggact

2401 aattgccgag agccgtgtga ggtgaaagtc tcatgcacgg ttcggaatgg gagtcgtggt

2461 aggtgactac cacttcgacc cctaat

3' end

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[Intron and flanking sequence]

5761 gtaactgtcg agaaaattga cgtagctctt tggtgatcat cgtctttcgt aaattatgcc
5821 atacttttgc cttttgttgg tgaagttttg ctaataattc gggagaggtt ggcatagata
5881 tcaaaggtaa tttggagata ttgtcttcag caacagtggt tataggtttt atttctgtaa
5941 acggaaaaag ttttttcaat gttagtagaa gttgaacacg ggtgatgggc tttttcagaa
6001 aaaagtgact aatatctttg atatttattt ctttttcttc ttgagaataa gcactcaaaa
6061 tgataatagg aatttgttgt gtttgtggtt ggtttttgat aatttcacta gattaggggt
6121 cgaagtggta gtcacctacc acgactccca ttccgaaccg tgcatgagac tttcacctca
6181 cacggctctc ggcaattagt cctttgtcat aggtactgtt aacacatcgt ctttccattc
6241 atagccattt tctaaccaat cgtagaggta gtcatttttg cttttgacat catgacagtg
6301 acgatgtaga gcttgaagat tgttgtaggt atcctttcca cctttcgatt tggggataat
6361 gtggtcaact tctatcaagt cttcaggtgt aaagtattgc ttacattgag gacatatacc
6421 tttttgtttc tttaagagtt ttgcgactct tgttggtgtc ccagaatatg tacctcgtct
6481 tttgctccag taagtccagt ttccgtcata gggtgaagct tcaggtttaa cccatgtgtg
6541 tctcaatatt cctgtttcgg cgtggtgata gaggactgct ccttttgttt ggaatgtcca
6601 gaatccgtgt tttccgtatg agaaatattt tttaagagct ttaatcaatg gtgtctcttt
6661 ctttttcctg cttactgtcc aagctctaag catattccat aatatgttgt cttcggattt
6721 gaatgttttc ttactgcaaa catttcggta gtaattacac catcctcgga ttatgggatt
6781 taatcttgtg attaatgctt tttgtggggc tttcttgttg gccttgatgg cctctttgat
6841 tgcctcatgg tgagctagta tttttttctt gcttggcttg attagtgttt tgaatccagt
6901 tagttgtgca ttttttccac ctgttttact agagtggtgt ttacccttgg ggtatgacct
6961 aatattgaat ccaaggaaat cgaagcctgg ttcaatggtt ttaccattat ggacaatact
7021 ttttagagtg tgtcttatgg aagtcttctc tggttttagt tccaatccga ctttttctaa
7081 ccattgtgca actagatttt tacattgtag aataacatcg taatctgtat gaagaattac
7141 gaaatcatcg gcgtagcgga tgattttggg tttatatccc tgtttaagac tgccatcttc
7201 tctccgtttt gtacggggga agtgattttc tatgtctatt atcattccgt gtagtgcaat
7261 gttagccaat aacggactta ttacaccacc ttgaggtgta cctgaatctg tttcctcaaa
7321 aatgcccttg tccattacac cgcattccaa ccattgttta atgattcttt tgatgttgtg
7381 tggacaatct actttggaca gtaggtaatc atggttaatc ttgtcgaagc atttggcgat
7441 atctgcatct agaacatatt ttgcattcgt ttttattgct aaaaatattc tactgatagc
7501 gtcttgtgcg cttctgcctg gacggaagcc ataagatgta ccctcaaatt gggcttccca
7561 gtatggttct aaggctgatt taactaaggc ttgcattgct ctatctttca tggtgggtat
7621 ccccagtcca cgtttttcat ctcttccagg tttaggtatc caaacccgtc tgagtgcctt
7681 ggctttgtaa ccttttaacc ttagttcgtt aactaacttt aatctttggt taggtcgtaa
7741 tgactttttc ccatcaactc cagcagtttt cttaccttgg ttgtcttggg tcactttgcg
7801 aatggctaag agctttgcgt aatgtgactt taacagtaac ttctgaagct ttttagcttt
7861 gactttatta cctgatttaa cagcttgaaa tattcttttt tgaagcttaa acactttcct
7921 ctggactttt gcccagttta tggtgttcca ttctggcgta gtcttggtta tactcgcatt
7981 cgacatttaa ctacctctaa tagagactat ttcttctaat taaccagcaa tacgtcagct
8041 tatccatatt cattacaaat aggcatttgc ttcttaattg cttctcacat ccatgaccct
8101 tgcgcttaag tttgtcacta cttacatcat cgacctgatg gtaagagcag tcatggactt
8161 aattcgttcc gttggtttgg gtgtattggt tttaggtttc atctctcccc caggttactt
8221 ttaggaatcg ttgtggatgt tacgaagaaa actccacttt tcaccttgtt cttttgaacg
8281 cagcctgtcg aacagatttg gctacttgga ggtcttgagg gttcaggacg atgattcagc
8341 gtaatgctta accgtgacca attgactgga ggaacgactt gccatgctgt ttcatgacgg
8401 gttccccttt taaccctgct tccatcctga gtttactaag tccaaaacgg agggttaagt
8461 tgtcactctt aggattgctc ccttgattcc gagtgtggct cctttagcca acaaaccaac
8521 agttatctag ttttctaggt tctagactag ctacacacct gtatttagta caggctttct
8581 agctaaacga atcgcacctt cctctccagc tattaagcaa ttctcaatca ttgtattaat
8641 tagtttatta tagaggatta agcttttatc tctcttcctt atgactcctc aacctatgaa
8701 taaagttcct gtttcatcct aattatctag aaaaaatttt ttaatcttga caaaatgact
8761 gagttgtggt attcattttt attgaccttg attttgacct aaagtttatt tatgcagttt
8821 aaatatctaa tttttaagca gcttcctcca caactgtttt ttattttttt gatagttatt
8881 tattatagta taggtttata tttgatgtta aatacatcaa taacttcaga tgagtctgct
8941 tatattgggg ctgcttatgc ttatactcaa gggttaggat taaatcaaga acatcctctt

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[ORF sequence]

MSNASITKTTPEWNTINWAKVQRKVFKLQKRIFQAVKSGNKVKAKKLQKLLLKSHYAK

LLAIRKVTQDNQGKKTAGVDGKKSLRPNQRLKLVNELRLKGYKAKALRRVWIPKPGRD

EKRGLGIPTMKDRAMQALVKSALEPYWEAQFEGTSYGFRPGRSAQDAISRIFLAIKTN

AKYVLDADIAKCFDKINHDYLLSKVDCPHNIKRIIKQWLECGVMDKGIFEETDSGTPQ

GGVISPLLANIALHGMIIDIENHFPRTKRREDGSLKQGYKPKIIRYADDFVILHTDYD

VILQCKNLVAQWLEKVGLELKPEKTSIRHTLKSIVHNGKTIEPGFDFLGFNIRSYPKG

KHHSSKTGGKNAQLTGFKTLIKPSKKKILAHHEAIKEAIKANKKAPQKALITRLNPII

RGWCNYYRNVCSKKTFKSEDNILWNMLRAWTVSRKKKETPLIKALKKYFSYGKHGFWT

FQTKGAVLYHHAETGILRHTWVKPEASPYDGNWTYWSKRRGTYSGTPTRVAKLLKKQK

GICPQCKQYFTPEDLIEVDHIIPKSKGGKDTYNNLQALHRHCHDVKSKNDYLYDWLEN

GYEWKDDVLTVPMTKD

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[Secondary structure]

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