C.w.I7

Sequence from Genbank entry (intron is on the antisense strand).

The boundaries of the intron are marked as red and ORF is marked

as blue, with start and stop codons underlined.

Intron on antisense strand

3' end

gt ttgagtcgag gggagctatt aaactccgcc cctctcagtt agatctggac
9541 gtgcgacttt caccgcatcc ggctcccgat aatctagact tttccagtct tacccatgtg
9601 gatgtaatcg tgacaacttt gatggactgc caaaaggttt tgggttctcc agttatcatg
9661 attcccatca atgtgatgga attggacttt ttcatcagat atgaatttaa gtccacagtg
9721 tccgcatgat tggttctgtc ttcttagaca tctagaggtg aaatcagtgt agagtttgct
9781 gttacgcttg ctccaatata ctgtatctcc gtcgtagggg gatttatttc ctttgacgct
9841 gacgaatcga ttttctgcgt atggaactga tgggaatgct tttaaaagta attccctagt
9901 tttgtagcgg tcaagtttct tttccttatt gaatttcttg aaggctctat aagccgttct
9961 ccataaggaa aatctggagc cactcatttt gcagtatcta tgataatttc gccatcctct
10021 gactagaggt gcaatttttt ctgcttttac tctagcccca atattcgagt tattaacgat
10081 ttttttgact ttattgataa aagttttata gttatcctct gatggaacac atctaaactt
10141 tccgttttgt tggactttaa aatgccagcc caggaagtca aatccatctg tcgagtgtac
10201 tagctttgtt ttgcttgact ttatttttag tcctcgttcg gctagaaact gttcaaccct
10261 taaaagtatc aactcagcgt tatcttttgg ctttaaaatg aaaaccatat catccgcata
10321 acggatgcta ttgtggaggt cttctattcc atctaacgct atgtttgcta atagagggct
10381 gaccactccc ccttgggggg ttcggagttc tggaaattca gggccgactc ctgcctttag
10441 acatttccaa aggccaagtt taatagcttg tggtgctatg acccgttcca ttattgatgt
10501 gtggtcaatc ctgtcgaaac acttttctat atctagctct agtattctct tattaatccc
10561 attagcgtgt gagcttaggt tattgaagag aattttttgc gcatcgtgcg ttgagcgtcc
10621 gggtctgaac ccatagcttt tggcgtggaa aagtgcctca tgtgctggtt ctatggcgta
10681 tttaacaagg cattgccatg ctctgtctgc catagtggga accttcagca ttctggttgt
10741 tccatccttt ttagggatgg gaactgctct tagctttgaa tgattccatt tgttagctgt
10801 gagtaacctt tttgctaagg cgaacctttg tttgaagttc agggattttt gcccatccac
10861 tcctgcggtt ctttttccag cgtttagctg tgtaacttgt cggactgcca gtaatcttgc
10921 tgctgaggat ttcagaatta gcttttgcag gttctttgct cgtaccctgt cattctctcg
10981 aatggctttg aacagtcttg tttgtaatcg gaaaagattc ctttggagtt tcttccaagg
11041 gagcttttgc caaagttcac tgaagttgat ttcgtgtcta accatgattt acgtacttga
11101 ccattttctg attacctcaa ggcagttacg ccttgtccta cccgaaataa aggggttcgg
11161 tgtctcgtct cacttacctg ggttttcgac ctttcccaag acctttattc cgtttttatt
11221 cgttccgacg gtgcgatttc ttgccatctt tagagcgaac cactttgccc atttgcctct
11281 cgagggttac agttatcatt cgaataatac tgtgagagta gcaaatcaac tcggtcattt
11341 ggattcagat tgaccggtca tacgtaggac acttttatag gttctgttta ctcatggatg
11401 actaccataa cgccagtgtg gtctatctgc tttgacctct gattgcgtcc ttttgccagc
11461 ttcagcctcc agaattccga gtctggtcac tgtggcaagg tttagagtca cctgtcctct
11521 caggggtgag aatttaactc acatcggctc cgtcagttat gtagttaaga attgttacga
11581 agaacctctt aactatcacc tcagcttatg aattaggctg agaacgaacc gcac

5' end

Intron on sense strand

5' end

1 gtgcggttcg ttctcagcct aattcataag ctgaggtgat agttaagagg ttcttcgtaa

61 caattcttaa ctacataact gacggagccg atgtgagtta aattctcacc cctgagagga

121 caggtgactc taaaccttgc cacagtgacc agactcggaa ttctggaggc tgaagctggc

181 aaaaggacgc aatcagaggt caaagcagat agaccacact ggcgttatgg tagtcatcca

241 tgagtaaaca gaacctataa aagtgtccta cgtatgaccg gtcaatctga atccaaatga

301 ccgagttgat ttgctactct cacagtatta ttcgaatgat aactgtaacc ctcgagaggc

361 aaatgggcaa agtggttcgc tctaaagatg gcaagaaatc gcaccgtcgg aacgaataaa

421 aacggaataa aggtcttggg aaaggtcgaa aacccaggta agtgagacga gacaccgaac

481 ccctttattt cgggtaggac aaggcgtaac tgccttgagg taatcagaaa atggtcaagt

541 acgtaaatca tggttagaca cgaaatcaac ttcagtgaac tttggcaaaa gctcccttgg

601 aagaaactcc aaaggaatct tttccgatta caaacaagac tgttcaaagc cattcgagag

661 aatgacaggg tacgagcaaa gaacctgcaa aagctaattc tgaaatcctc agcagcaaga

721 ttactggcag tccgacaagt tacacagcta aacgctggaa aaagaaccgc aggagtggat

781 gggcaaaaat ccctgaactt caaacaaagg ttcgccttag caaaaaggtt actcacagct

841 aacaaatgga atcattcaaa gctaagagca gttcccatcc ctaaaaagga tggaacaacc

901 agaatgctga aggttcccac tatggcagac agagcatggc aatgccttgt taaatacgcc

961 atagaaccag cacatgaggc acttttccac gccaaaagct atgggttcag acccggacgc

1021 tcaacgcacg atgcgcaaaa aattctcttc aataacctaa gctcacacgc taatgggatt

1081 aataagagaa tactagagct agatatagaa aagtgtttcg acaggattga ccacacatca

1141 ataatggaac gggtcatagc accacaagct attaaacttg gcctttggaa atgtctaaag

1201 gcaggagtcg gccctgaatt tccagaactc cgaacccccc aagggggagt ggtcagccct

1261 ctattagcaa acatagcgtt agatggaata gaagacctcc acaatagcat ccgttatgcg

1321 gatgatatgg ttttcatttt aaagccaaaa gataacgctg agttgatact tttaagggtt

1381 gaacagtttc tagccgaacg aggactaaaa ataaagtcaa gcaaaacaaa gctagtacac

1441 tcgacagatg gatttgactt cctgggctgg cattttaaag tccaacaaaa cggaaagttt

1501 agatgtgttc catcagagga taactataaa acttttatca ataaagtcaa aaaaatcgtt

1561 aataactcga atattggggc tagagtaaaa gcagaaaaaa ttgcacctct agtcagagga

1621 tggcgaaatt atcatagata ctgcaaaatg agtggctcca gattttcctt atggagaacg

1681 gcttatagag ccttcaagaa attcaataag gaaaagaaac ttgaccgcta caaaactagg

1741 gaattacttt taaaagcatt cccatcagtt ccatacgcag aaaatcgatt cgtcagcgtc

1801 aaaggaaata aatcccccta cgacggagat acagtatatt ggagcaagcg taacagcaaa

1861 ctctacactg atttcacctc tagatgtcta agaagacaga accaatcatg cggacactgt

1921 ggacttaaat tcatatctga tgaaaaagtc caattccatc acattgatgg gaatcatgat

1981 aactggagaa cccaaaacct tttggcagtc catcaaagtt gtcacgatta catccacatg

2041 ggtaagactg gaaaagtcta gattatcggg agccggatgc ggtgaaagtc gcacgtccag

2101 atctaactga gaggggcgga gtttaatagc tcccctcgac tcaaac

3' end

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[Intron and flanking sequence]

9121 caacatcttt ccagcctaaa atttctgtga cttttttctc cagatttttg taggtacgga
9181 aaaattccgc aatttcttct aaacggtgag gagcaatgtc tttgatagat tttacttcgc
9241 taaagcgtgg atcttcatca gggacacaaa gaactttttc atcgcgatct ccaccatcga
9301 tcatttctaa cataccaata ggacgggctg caatgacaca acccgggaaa gtaggttgat
9361 caatgatcac catgccatcc aaaggatcac cgtcatccgc taaggtatta ggaacaaacc
9421 catagtcgta aggatattgt accgaggcaa acaaaacgcg atcgagagca aaggctttca
9481 tatccttggt ttgagtcgag gggagctatt aaactccgcc cctctcagtt agatctggac
9541 gtgcgacttt caccgcatcc ggctcccgat aatctagact tttccagtct tacccatgtg
9601 gatgtaatcg tgacaacttt gatggactgc caaaaggttt tgggttctcc agttatcatg
9661 attcccatca atgtgatgga attggacttt ttcatcagat atgaatttaa gtccacagtg
9721 tccgcatgat tggttctgtc ttcttagaca tctagaggtg aaatcagtgt agagtttgct
9781 gttacgcttg ctccaatata ctgtatctcc gtcgtagggg gatttatttc ctttgacgct
9841 gacgaatcga ttttctgcgt atggaactga tgggaatgct tttaaaagta attccctagt
9901 tttgtagcgg tcaagtttct tttccttatt gaatttcttg aaggctctat aagccgttct
9961 ccataaggaa aatctggagc cactcatttt gcagtatcta tgataatttc gccatcctct
10021 gactagaggt gcaatttttt ctgcttttac tctagcccca atattcgagt tattaacgat
10081 ttttttgact ttattgataa aagttttata gttatcctct gatggaacac atctaaactt
10141 tccgttttgt tggactttaa aatgccagcc caggaagtca aatccatctg tcgagtgtac
10201 tagctttgtt ttgcttgact ttatttttag tcctcgttcg gctagaaact gttcaaccct
10261 taaaagtatc aactcagcgt tatcttttgg ctttaaaatg aaaaccatat catccgcata
10321 acggatgcta ttgtggaggt cttctattcc atctaacgct atgtttgcta atagagggct
10381 gaccactccc ccttgggggg ttcggagttc tggaaattca gggccgactc ctgcctttag
10441 acatttccaa aggccaagtt taatagcttg tggtgctatg acccgttcca ttattgatgt
10501 gtggtcaatc ctgtcgaaac acttttctat atctagctct agtattctct tattaatccc
10561 attagcgtgt gagcttaggt tattgaagag aattttttgc gcatcgtgcg ttgagcgtcc
10621 gggtctgaac ccatagcttt tggcgtggaa aagtgcctca tgtgctggtt ctatggcgta
10681 tttaacaagg cattgccatg ctctgtctgc catagtggga accttcagca ttctggttgt
10741 tccatccttt ttagggatgg gaactgctct tagctttgaa tgattccatt tgttagctgt
10801 gagtaacctt tttgctaagg cgaacctttg tttgaagttc agggattttt gcccatccac
10861 tcctgcggtt ctttttccag cgtttagctg tgtaacttgt cggactgcca gtaatcttgc
10921 tgctgaggat ttcagaatta gcttttgcag gttctttgct cgtaccctgt cattctctcg
10981 aatggctttg aacagtcttg tttgtaatcg gaaaagattc ctttggagtt tcttccaagg
11041 gagcttttgc caaagttcac tgaagttgat ttcgtgtcta accatgattt acgtacttga
11101 ccattttctg attacctcaa ggcagttacg ccttgtccta cccgaaataa aggggttcgg
11161 tgtctcgtct cacttacctg ggttttcgac ctttcccaag acctttattc cgtttttatt
11221 cgttccgacg gtgcgatttc ttgccatctt tagagcgaac cactttgccc atttgcctct
11281 cgagggttac agttatcatt cgaataatac tgtgagagta gcaaatcaac tcggtcattt
11341 ggattcagat tgaccggtca tacgtaggac acttttatag gttctgttta ctcatggatg
11401 actaccataa cgccagtgtg gtctatctgc tttgacctct gattgcgtcc ttttgccagc
11461 ttcagcctcc agaattccga gtctggtcac tgtggcaagg tttagagtca cctgtcctct
11521 caggggtgag aatttaactc acatcggctc cgtcagttat gtagttaaga attgttacga
11581 agaacctctt aactatcacc tcagcttatg aattaggctg agaacgaacc gcactcatac
11641 tcgtatttat tcttgcttcc tgccggaatt tcgattaaaa cattgattag accaggtttt
11701 ggttgagccg gaatgagtga taagtccacg attttctccg aatgcttact aattactttg
11761 attgaggaag atagtgagat tatggcttga gaacgttaat attattcttt cttgagtcca
11821 taattttccc ttcggtgctt attttacaac gaatttaccc caagattgat atgaatcaca
11881 tgatcactgt gatcaaaacc attgagggta aaggagaaac cgaagataat aaatacagga
11941 ttcaaaaagc gggtgcatac aacagcacag ggttatttat tgtttttaac agtgaatggc

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[ORF sequence]

MVRHEINFSELWQKLPWKKLQRNLFRLQTRLFKAIRENDRVRAKNLQKLILKSSAARL

LAVRQVTQLNAGKRTAGVDGQKSLNFKQRFALAKRLLTANKWNHSKLRAVPIPKKDGT

TRMLKVPTMADRAWQCLVKYAIEPAHEALFHAKSYGFRPGRSTHDAQKILFNNLSSHA

NGINKRILELDIEKCFDRIDHTSIMERVIAPQAIKLGLWKCLKAGVGPEFPELRTPQG

GVVSPLLANIALDGIEDLHNSIRYADDMVFILKPKDNAELILLRVEQFLAERGLKIKS

SKTKLVHSTDGFDFLGWHFKVQQNGKFRCVPSEDNYKTFINKVKKIVNNSNIGARVKA

EKIAPLVRGWRNYHRYCKMSGSRFSLWRTAYRAFKKFNKEKKLDRYKTRELLLKAFPS

VPYAENRFVSVKGNKSPYDGDTVYWSKRNSKLYTDFTSRCLRRQNQSCGHCGLKFISD

EKVQFHHIDGNHDNWRTQNLLAVHQSCHDYIHMGKTGKV

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[Secondary structure]

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