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Information of M.m.I1-2 intron (Format of information for each intron)
[Intron and flanking sequence]
Note: Multiple insertions
M.m.I1-2 AE013516 (7432-10327)
Sequence
from Genbank entry. Intron is identified in red.
The ORF
is identified in blue with start and stop codons
underlined.
A putative transposase (in green) inserted into the intron ORF.
5' end
gtgcgacga
7441 gaagttatgc tatggattgc ggaacaaccc gccattctat ccattcagaa tgtccctatt
7501 ctgatgtgca tttctggcaa cggatctgtg caaagctcag aggacaatga ggtgtaaaac
7561 tgaacctgac agttccaaac cgctagggaa aaggatatat ggagaaccga aaggtgaaga
7621 tctgtttgag agatcgtaac gtataacatg cgaaagcagg ttaatacgca tgagccaaaa
7681 tggcatagga gcctggttat gacattccat gttgtgtcat gacgaatgga catatggctt
7741 ccggtctata ggatcctcct aagtatccaa caactatcta tgacatagaa ctcggtaaac
7801 catttgtggt ccttaataag gtaggaattc cgcaaggaaa accgacgcca caggtggcag
7861 aggaattggc aaaaagcaaa cggtttcctg taatggggaa tatagaggaa aaaaaatgcc
7921 tcaatgcgaa agcatgccca cttgccatta gtcacgaaag caacagggat
tgtttaatta
7981 tgaatgtaag agaaccagag ataacttcgg ttacggacct tacagacaaa gaactcactc
8041 tacgatggaa aagtattgat tggaaaagag tgaaagaagc cgttaataac ctacagtctc
8101 gaattgcaag tgcagctaag aacggaaatt ggaaaactgt gaacaaactc tcccgtcttc
8161 tgacccggtc cttttatgcc aaacttcttt cggtacgtaa agtaaccact aacaagggaa
8221 gtcgaactcc cggaatagat ggcgtcattt ggtcatcatc ggcagataag atgcgtgccg
8281 ctctacaact aacgaacaaa ggctatcgtg caaaaccatt aacacggaag tacattcgaa
8341 agaagagcgg taaactacga cctcttagca taccaactat gtttgacaga gcaatgcaaa
8401 ctttgcactc tctggtgttg ggcgcaatcg aatctgcagc aggtgacaaa acttcgtttg
8461 ggtttaaacc ttatcgttct acaaaagatg cttatgccta ccttcacctc tgtttaagca
8521 agaaagtttc tcctgaatgg atcgttgaag gtgacattaa agcttgcttt gatgaaatca
8581 gccataattg atacttgata acatccctct ggataaacga atccttaaag agttcctaaa
8641 agccggatat atcgagaatt aggcattgtt aatcaaatat agctaattct ttatttctgt
8701 gtttcatcaa tagaagaaca gagtacttta gcatttcaag actcttcgta taacactttg
8761 tctttcgtct caaccttgct agaaagtgcc tgaatatgct gttatatcct tcaactgtat
8821 acgtttctgc ttttgattga gtatgaatag tttctggaat aaactctgca tatggtttcc
8881 agtgatcagt cattacttct tcaatctttt tcgtctttaa tttttcccag atcagttgtc
8941 cagtttctgt tcctctgctg ccaaaagagc agttgatgaa ttttttccca actctatcaa
9001 cagcaatcca tatccagcaa tatttttttt gttaccgatg taagtgtgca tctcatccat
9061 ttcaacaata gatatctcat tttcgctttt caggtcctct agctcccgac caaatttctt
9121 tatccatttt tgaacagaaa catgacttac acctaaaaat cgccctattg agcgaaatcc
9181 taatccttca agatagagtt gcaaagcttg tctcttaaca gaagtggggc tagcagttga
9241 tttcagctct acggaatagt tatatccaca atcatggcat ttgtaccgtt gacgtccatc
9301 aactataccg ttctttttgt gagtggaact attacatctt gggcagtcca tacagaacta
9361 taggctctca taatagataa ctatgtttaa ttaccaaagc ccgagaatta ttatctgttt
9421 cctaccgaaa aaggtacacc tcaaggaggg cctatatctc caataattgg aaatatgtcc
9481 ttaaacggct tagaaaacgc cttagcgatg agattttact ccagatcaga tggaacaatt
9541 gacaaatctc atcaaaacag acacaaggtt aattatgttc gttttgctga tgaccttgtg
9601 gtaactgcca attccccgga aacggctctt gaaatagtcg atgtcatcca agcattttta
9661 gatcctcgtg gacttaagct cagcgaagaa aagactcttg tgaccaatat tagtgaaggg
9721 ttcaatttcc taggatggaa cttcaggaaa tataaaggaa aacttcttcc gaagccatct
9781 aaagattctc aaaaggaagt tattaagaaa atccgtgacg tacttcacaa agcaaaagca
9841 tgggatcaag accgattgat acaaacactc aacccaatca ttaggggatg ggcacagtat
9901 cataatcacg cagtttcttc tgctatcttc aacaaacttg atgaaatagt ctataacatg
9961 cttatctcct gggcgaaaag aagacactca aataaaggtt tcacctggat aacgaccaaa
10021 tactggcata aatccggtaa aagaaaatac gtattctgca cagaactaca tacgttggag
10081 agattctcca atgccaaaat tgttaggcaa agactagcaa gccttaataa gaatccattt
10141 atcgacaaag aatatttcga acaatggaaa ttcatggaat accaccggaa gaaacgcatc
10201 actaacccca attttgttct aaactgacac ccgaaagggt agtagtggct cgagccggat
10261 gaatcgaaag gttcaagtcc ggttcctaga agacggggta gggagaaatc ccaccctgtt
10321 attcgac
3' end
[Intron and flanking sequence]
7021
agaaagagca agcttgatcc tttcaaacct tacatacaag aaaaactcaa agaaggtccc
7081 tatactgctg ctcgcctcta tcgggaaatc aaagaaatgg gttttgatgg aggaaaaacc
7141 atagtcaagg acttcgtaca aaaaatccga cccgagcagg gaatccctgc cgtactccgc
7201 tatgaaacaa aaccaggtgt ccaggctcag gttgactggg gagagttagg aacagttgag
7261 gttgatggaa aggtaaagaa actcttttgc ttcaacatga ttcttggata ttccagaatg
7321 agatatgttg aatttacact gagtatagac actccaactc ttatccagtg tcatctgaat
7381 gcttttgagt actttggagg atttacacag gagattctat acgataacat ggtgcgacga
7441 gaagttatgc tatggattgc ggaacaaccc gccattctat ccattcagaa tgtccctatt
7501 ctgatgtgca tttctggcaa cggatctgtg caaagctcag aggacaatga ggtgtaaaac
7561 tgaacctgac agttccaaac cgctagggaa aaggatatat ggagaaccga aaggtgaaga
7621 tctgtttgag agatcgtaac gtataacatg cgaaagcagg ttaatacgca tgagccaaaa
7681 tggcatagga gcctggttat gacattccat gttgtgtcat gacgaatgga catatggctt
7741 ccggtctata ggatcctcct aagtatccaa caactatcta tgacatagaa ctcggtaaac
7801 catttgtggt ccttaataag gtaggaattc cgcaaggaaa accgacgcca caggtggcag
7861 aggaattggc aaaaagcaaa cggtttcctg taatggggaa tatagaggaa aaaaaatgcc
7921 tcaatgcgaa agcatgccca cttgccatta gtcacgaaag caacagggat tgtttaatta
7981 tgaatgtaag agaaccagag ataacttcgg ttacggacct tacagacaaa gaactcactc
8041 tacgatggaa aagtattgat tggaaaagag tgaaagaagc cgttaataac ctacagtctc
8101 gaattgcaag tgcagctaag aacggaaatt ggaaaactgt gaacaaactc tcccgtcttc
8161 tgacccggtc cttttatgcc aaacttcttt cggtacgtaa agtaaccact aacaagggaa
8221 gtcgaactcc cggaatagat ggcgtcattt ggtcatcatc ggcagataag atgcgtgccg
8281 ctctacaact aacgaacaaa ggctatcgtg caaaaccatt aacacggaag tacattcgaa
8341 agaagagcgg taaactacga cctcttagca taccaactat gtttgacaga gcaatgcaaa
8401 ctttgcactc tctggtgttg ggcgcaatcg aatctgcagc aggtgacaaa acttcgtttg
8461 ggtttaaacc ttatcgttct acaaaagatg cttatgccta ccttcacctc tgtttaagca
8521 agaaagtttc tcctgaatgg atcgttgaag gtgacattaa agcttgcttt gatgaaatca
8581 gccataattg atacttgata acatccctct ggataaacga atccttaaag agttcctaaa
8641 agccggatat atcgagaatt aggcattgtt aatcaaatat agctaattct ttatttctgt
8701 gtttcatcaa tagaagaaca gagtacttta gcatttcaag actcttcgta taacactttg
8761 tctttcgtct caaccttgct agaaagtgcc tgaatatgct gttatatcct tcaactgtat
8821 acgtttctgc ttttgattga gtatgaatag tttctggaat aaactctgca tatggtttcc
8881 agtgatcagt cattacttct tcaatctttt tcgtctttaa tttttcccag atcagttgtc
8941 cagtttctgt tcctctgctg ccaaaagagc agttgatgaa ttttttccca actctatcaa
9001 cagcaatcca tatccagcaa tatttttttt gttaccgatg taagtgtgca tctcatccat
9061 ttcaacaata gatatctcat tttcgctttt caggtcctct agctcccgac caaatttctt
9121 tatccatttt tgaacagaaa catgacttac acctaaaaat cgccctattg agcgaaatcc
9181 taatccttca agatagagtt gcaaagcttg tctcttaaca gaagtggggc tagcagttga
9241 tttcagctct acggaatagt tatatccaca atcatggcat ttgtaccgtt gacgtccatc
9301 aactataccg ttctttttgt gagtggaact attacatctt gggcagtcca tacagaacta
9361 taggctctca taatagataa ctatgtttaa ttaccaaagc ccgagaatta ttatctgttt
9421 cctaccgaaa aaggtacacc tcaaggaggg cctatatctc caataattgg aaatatgtcc
9481 ttaaacggct tagaaaacgc cttagcgatg agattttact ccagatcaga tggaacaatt
9541 gacaaatctc atcaaaacag acacaaggtt aattatgttc gttttgctga tgaccttgtg
9601 gtaactgcca attccccgga aacggctctt gaaatagtcg atgtcatcca agcattttta
9661 gatcctcgtg gacttaagct cagcgaagaa aagactcttg tgaccaatat tagtgaaggg
9721 ttcaatttcc taggatggaa cttcaggaaa tataaaggaa aacttcttcc gaagccatct
9781 aaagattctc aaaaggaagt tattaagaaa atccgtgacg tacttcacaa agcaaaagca
9841 tgggatcaag accgattgat acaaacactc aacccaatca ttaggggatg ggcacagtat
9901 cataatcacg cagtttcttc tgctatcttc aacaaacttg atgaaatagt ctataacatg
9961 cttatctcct gggcgaaaag aagacactca aataaaggtt tcacctggat aacgaccaaa
10021 tactggcata aatccggtaa aagaaaatac gtattctgca cagaactaca tacgttggag
10081 agattctcca atgccaaaat tgttaggcaa agactagcaa gccttaataa gaatccattt
10141 atcgacaaag aatatttcga acaatggaaa ttcatggaat accaccggaa gaaacgcatc
10201 actaacccca attttgttct aaactgacac ccgaaagggt agtagtggct cgagccggat
10261 gaatcgaaag gttcaagtcc ggttcctaga agacggggta gggagaaatc ccaccctgtt
10321 attcgacaaa caggttgtta tcaaaagagc cttaaaatca tcagattctg aatggaactc
10381 acagtttgag gatttcttca aatgctttgg ttttactccc cggttatgca ggccttacag
10441 gcctcagaca aaaggtaaaa ttgaaaatac tgtcggctat gtcaagaggg atttcgtcct
10501 tggaagacag tttacctctc tcgaagacct gaacggccaa gttcacaggt ggttggaaag
10561 ggtaaactca actgtccatg gaacaaccta tcaaatccct cttgaacgct ttaaggagga
10621 gaacctgagc cctctggatc aggttcctcc ttacaaagtt gtccataagg agaccagaaa
MNVREPEITSVTDLTDKELTLRWKSIDWKRVKEAVNNLQSRIASAAKNGNWKTVNKLS
RLLTRSFYAKLLSVRKVTTNKGSRTPGIDGVIWSSSADKMRAALQLTNKGYRAKPLTR
KYIRKKSGKLRPLSIPTMFDRAMQTLHSLVLGAIESAAGDKTSFGFKPYRSTKDAYAY
LHLCLSKKVSPEWIVEGDIKACFDEISHNXILDNIPLDKRILKEFLKAGYIE
transposase
NYYLFPTEKGTPQGGPISPIIGNMSLNGLENALAMRFYSRSDGTIDKSHQNRHKVNYV
RFADDLVVTANSPETALEIIDVIQAFLDPRGLKLSEEKTLVTNISEGFNFLGWNFRKY
KGKLLPKPSKDSQKEVIKKIRDVLHKAKAWDQDRLIQTLNPIIRGWAQYHNHAVSSAI
FNKLDEIVYNMLISWAKRRHSNKGFTWITTKYWHKSGKRKYVFCTELHTLERFSNAKI
VRQRLASLNKNPFIDKEYFEQWKFMEYHRKKRITNPNFVLN

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