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Information for Mc.b.I1-1 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

Note: Redundant copy
NZ_AADH01000006 (71831-74849)

Note: Multiple insertions
Mc.b.I1-1    CP000300 (712545-709527)
Mc.b.I1-2    CP000300 (800706-803724)
Mc.b.I1-3    CP000300 (2145603-2148621)
Mc.b.I1-4    CP000300 (2106261-2109279)

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

                 gtgcgacaag aagttataac atgaattgcg gcaacgctat cccttccatt
71881 tgggttaatc ctactatgac acgcgccaat ggtaacgttg gggtatgaag ctcataggac
71941 aatgtggaga atctcgaaag tctaattcga aacatccact aggataagaa cactaagaag
72001 aaacgaaagt tgaaccattg taagaatcgt aaagcagaac aagcgaaatt agattgatta
72061 cgcttgaacc aaaaggtaca gaatccgacc attatggctc ttatcacatt atgggaaatg
72121 gacacatgat tttcggttta tagatggctt ctaaggtctt cgcaattatt catgttatag
72181 aacttggtaa gccctatatg ttcccttcgg ggtaggaatc ctgcaaagaa tgacgatgac
72241 atagagggta gaggaaagga gtagaaagcg aatgacaaac tgtaatggtg tgtataaggg
72301 ttcaaaattt gccctaatcc gaaaggatgc agacttactc tatggtatca aaacgtaaga
72361 aggaaggtat gacctatgaa tgtaagctat tcaaatacat caaaagatga agcaaaaaca
72421 ctgtttagtg gacatgctga acttaacgat gagaaactta cagacatgta acacatgtta
72481 ataggctaca agtcaggatt acgaaggcag ttattgaaga aaattggaat ttgcaattaa
72541 ttccaaaaac aataactgtt gcctgaaaag gttatgagat gcttgagctg tatgaaagaa
72601 aactttcacg tacagttctt aggcgagaaa gagggagtaa tccctctgac ttagccgaca
72661 atactaagaa gaacgtaaaa gtgaaccatt gtaagaatcg tgaattgcaa caagcgaaac
72721 tagattgata cgcttgaact aaaaaggtat agaatcagac tataatggtt ttgcatacat
72781 tataggaaat ggacatatga ttctcggttt atagatggct tctaaggtat tcgcaattat
72841 tcatgttata gaacttggta agccctatat gttcccttcg gggtaggaat tccgtaagga
72901 aggacaatga catagagggt aaaggaaagg agtagaaagc gaatgataat ttgtaatgaa
72961 ttatataggg gttcagaatt tgccctaatc cgaaaggatg cagacttact ctatggtatc
73021 aaaacgtatg aatgaaggta taactatgaa tgtaagaatt tcaaatacac caaataatga
73081 agcagaagcc cttagtggtc atgctgaatt aaatggtgag aagcttacag atatgctcaa
73141 ctggaatttc atcaattgga gttccgttga atcacatgtt aatagaatac aagtcagaat
73201 tacgaaagca gttattaaca aaaattggaa tttagtaaaa agactaagtt atttgctaac
73261 ccattctcac tatgctaaac tgttagctgt cagaaaggtt attcgaaata agggtagaag
73321 aacagcagga atcgatggag aattctggtc aacaccagtt tccaaagtga atgcggctcg
73381 aagtctatct gataaaagat ataaggcaaa accattaaaa agaatcttta ttgagaaata
73441 tggttctgat aagaagcgac ctttaggtat cccgaccatg tacgatagag ctatgcaagc
73501 attatatgca ttagcacttg accccattgc agaagtaaca gcagataaac gttcttttgg
73561 attcagaaaa ttcagaagta cacatgatgc ttgcagtcaa atttttggaa caataagcaa
73621 aaaggattct gcacaatgta tactggaagg cgatattaaa ggttgtttcg acaacatcag
73681 tcaccaatgg ttaattgaca atatcccaat ggataaatca attcttaaac aattcctcaa
73741 agcaggattt gtttatgaaa attctctatt tccaacgaaa gcaggaacac cacaaggcgg
73801 tattatatca ccaatattag ccaacatgac cttagatgga attgaaggtg tattggctga
73861 caaatatcat cgaggtgtaa gcggtaaaat aacaactcgt caacgtgcaa aacacaaagt
73921 taattttgtg cgatacgcag atgattttat tgttactgca aagactaaag aaatagcaga
73981 agaagcaaaa gaattgatta agaatttcct aacggataga ggtttagaac tatctgatga
74041 aaaaaccctt attactcaca tcgatgatgg ttttgacttt ttaggttgga atgtcagaaa
74101 atacaaagga aaacttctca taaaaccgtc taagaaatct atcaagaaag taactgaaaa
74161 aatcagtaat actatcaaag atggaaaaac ttggacacaa gaagatttaa tctctaaact
74221 taaccctatc ataactggat ggtcaaatta tcatcaagga gtggcttcca aagaaacatt
74281 ctccttaatt gattttaaga tatggaatat actttggaaa tgggctaaga gaagacaccc
74341 catgaaatca agaacttgga ttgcacacaa atactggcat cccaaaggaa cgaggaaatg
74401 ggtattttca acaatgaaaa accaacttaa attaatgtca gataaaatga tagttcgaaa
74461 cccacaaata aaactggata agaaccctta cactgacacc gaatactttg ttgaacgcaa
74521 gctcaatcaa ggttctaaaa agttatcagg aaagtttaaa accgtatgga agaatcaaaa
74581 aggcaaatgt ccgttttgta atctattgat tgacattaac aacggtggag aggaacgccc
74641 tttacatcat aaaaatggaa atcatgacga taatggaata acaaacttag tttatgcaca
74701 tgtatattgt catagacaat atcatgcaaa taatccaaaa ataactgttg cccgacaagg
74761 gttaagagat gcttgagctg tgtgaggtga aagtctcacg cacggttctt aggcgagaaa
74821 gagggagtaa tctctctgac ttagccgac

3' end

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[Intron and flanking sequence]

71461 tgacctattt tataaaaata gagactcaat tgatattact gcaattgatt ccactgggtt
71521 cacaagtggt tattgtagca attattattc ctggcgaatt aaaaagtgga ggcgaagtta
71581 tgtaaagacc agcatttcgg ttgatgttag taaatttgta atcactggtt acaagatttc
71641 tggaaaacca gttcatgatg caaaacatgc aagtgcgaca agaagctaaa acatgaattg
71701 cggcaacgct atcccttcca tttgggataa tcctactatg atatgcgtca atggtaacgt
71761 tggggtgtaa agctcatagg acaatgtgga gaaattcgga agtctaatct gaatcatctg
71821 ctaggataag gtgcgacaag aagttataac atgaattgcg gcaacgctat cccttccatt
71881 tgggttaatc ctactatgac acgcgccaat ggtaacgttg gggtatgaag ctcataggac
71941 aatgtggaga atctcgaaag tctaattcga aacatccact aggataagaa cactaagaag
72001 aaacgaaagt tgaaccattg taagaatcgt aaagcagaac aagcgaaatt agattgatta
72061 cgcttgaacc aaaaggtaca gaatccgacc attatggctc ttatcacatt atgggaaatg
72121 gacacatgat tttcggttta tagatggctt ctaaggtctt cgcaattatt catgttatag
72181 aacttggtaa gccctatatg ttcccttcgg ggtaggaatc ctgcaaagaa tgacgatgac
72241 atagagggta gaggaaagga gtagaaagcg aatgacaaac tgtaatggtg tgtataaggg
72301 ttcaaaattt gccctaatcc gaaaggatgc agacttactc tatggtatca aaacgtaaga
72361 aggaaggtat gacctatgaa tgtaagctat tcaaatacat caaaagatga agcaaaaaca
72421 ctgtttagtg gacatgctga acttaacgat gagaaactta cagacatgta acacatgtta
72481 ataggctaca agtcaggatt acgaaggcag ttattgaaga aaattggaat ttgcaattaa
72541 ttccaaaaac aataactgtt gcctgaaaag gttatgagat gcttgagctg tatgaaagaa
72601 aactttcacg tacagttctt aggcgagaaa gagggagtaa tccctctgac ttagccgaca
72661 atactaagaa gaacgtaaaa gtgaaccatt gtaagaatcg tgaattgcaa caagcgaaac
72721 tagattgata cgcttgaact aaaaaggtat agaatcagac tataatggtt ttgcatacat
72781 tataggaaat ggacatatga ttctcggttt atagatggct tctaaggtat tcgcaattat
72841 tcatgttata gaacttggta agccctatat gttcccttcg gggtaggaat tccgtaagga
72901 aggacaatga catagagggt aaaggaaagg agtagaaagc gaatgataat ttgtaatgaa
72961 ttatataggg gttcagaatt tgccctaatc cgaaaggatg cagacttact ctatggtatc
73021 aaaacgtatg aatgaaggta taactatgaa tgtaagaatt tcaaatacac caaataatga
73081 agcagaagcc cttagtggtc atgctgaatt aaatggtgag aagcttacag atatgctcaa
73141 ctggaatttc atcaattgga gttccgttga atcacatgtt aatagaatac aagtcagaat
73201 tacgaaagca gttattaaca aaaattggaa tttagtaaaa agactaagtt atttgctaac
73261 ccattctcac tatgctaaac tgttagctgt cagaaaggtt attcgaaata agggtagaag
73321 aacagcagga atcgatggag aattctggtc aacaccagtt tccaaagtga atgcggctcg
73381 aagtctatct gataaaagat ataaggcaaa accattaaaa agaatcttta ttgagaaata
73441 tggttctgat aagaagcgac ctttaggtat cccgaccatg tacgatagag ctatgcaagc
73501 attatatgca ttagcacttg accccattgc agaagtaaca gcagataaac gttcttttgg
73561 attcagaaaa ttcagaagta cacatgatgc ttgcagtcaa atttttggaa caataagcaa
73621 aaaggattct gcacaatgta tactggaagg cgatattaaa ggttgtttcg acaacatcag
73681 tcaccaatgg ttaattgaca atatcccaat ggataaatca attcttaaac aattcctcaa
73741 agcaggattt gtttatgaaa attctctatt tccaacgaaa gcaggaacac cacaaggcgg
73801 tattatatca ccaatattag ccaacatgac cttagatgga attgaaggtg tattggctga
73861 caaatatcat cgaggtgtaa gcggtaaaat aacaactcgt caacgtgcaa aacacaaagt
73921 taattttgtg cgatacgcag atgattttat tgttactgca aagactaaag aaatagcaga
73981 agaagcaaaa gaattgatta agaatttcct aacggataga ggtttagaac tatctgatga
74041 aaaaaccctt attactcaca tcgatgatgg ttttgacttt ttaggttgga atgtcagaaa
74101 atacaaagga aaacttctca taaaaccgtc taagaaatct atcaagaaag taactgaaaa
74161 aatcagtaat actatcaaag atggaaaaac ttggacacaa gaagatttaa tctctaaact
74221 taaccctatc ataactggat ggtcaaatta tcatcaagga gtggcttcca aagaaacatt
74281 ctccttaatt gattttaaga tatggaatat actttggaaa tgggctaaga gaagacaccc
74341 catgaaatca agaacttgga ttgcacacaa atactggcat cccaaaggaa cgaggaaatg
74401 ggtattttca acaatgaaaa accaacttaa attaatgtca gataaaatga tagttcgaaa
74461 cccacaaata aaactggata agaaccctta cactgacacc gaatactttg ttgaacgcaa
74521 gctcaatcaa ggttctaaaa agttatcagg aaagtttaaa accgtatgga agaatcaaaa
74581 aggcaaatgt ccgttttgta atctattgat tgacattaac aacggtggag aggaacgccc
74641 tttacatcat aaaaatggaa atcatgacga taatggaata acaaacttag tttatgcaca
74701 tgtatattgt catagacaat atcatgcaaa taatccaaaa ataactgttg cccgacaagg
74761 gttaagagat gcttgagctg tgtgaggtga aagtctcacg cacggttctt aggcgagaaa
74821 gagggagtaa tctctctgac ttagccgaca gacattgcga ttgcaatgtc atcgcaatag
74881 gagatctaga tattatgtga tggataaagc ctataattct gaaaacatac acaattgacg
74941 agggaaaaac tcggatcaat agcaattgtt ccactgagac aacgtgaatg aaagcgaatc
75001 taaggaatat atcgtagaaa atgttacagg aattcgatag taagatatac tctatgtgga
75061 atttgagtga aacgatgttc tcagctttga aaagaaagta tggagaaaac ttacgtgcga
75121 gaaagtatcg aaatcaagta aaagaagtga agttcaaagt gatattacac aatcctgata

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[ORF sequence]

MQTYSMVSKRMNEGITMNVRISNTPNNEAEALSGHAELNGEKLTDMLNWNFINWSSVE

SHVNRIQVRITKAVINKNWNLVKRLSYLLTHSHYAKLLAVRKVIRNKGRRTAGIDGEF

WSTPVSKVNAARSLSDKRYKAKPLKRIFIEKYGSDKKRPLGIPTMYDRAMQALYALAL

DPIAEVTADKRSFGFRKFRSTHDACSQIFGTISKKDSAQCILEGDIKGCFDNISHQWL

IDNIPMDKSILKQFLKAGFVYENSLFPTKAGTPQGGIISPILANMTLDGIEGVLADKY

HRGVSGKITTRQRAKHKVNFVRYADDFIVTAKTKEIAEEAKELIKNFLTDRGLELSDE

KTLITHIDDGFDFLGWNVRKYKGKLLIKPSKKSIKKVTEKISNTIKDGKTWTQEDLIS

KLNPIITGWSNYHQGVASKETFSLIDFKIWNILWKWAKRRHPMKSRTWIAHKYWHPKG

TRKWVFSTMKNQLKLMSDKMIVRNPQIKLDKNPYTDTEYFVERKLNQGSKKLSGKFKT

VWKNQKGKCPFCNLLIDINNGGEERPLHHKNGNHDDNGITNLVYAHVYCHRQYHANNP

KITVARQGLRDA

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[Secondary structure]

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| Introduction | Intron secondary structure | Intron ORF structure | Introns listed by organism | Bacterial intron fragments | Alignment of insertion sequence |

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