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Information for  intron My.va.I1  (Format of information for each intron) 

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

                                               t tgcgtcctga aagttggact

3001 ggactagcgg gtggaagtcc cgtcccggta ggtaccggag cgccgggtag caggccccgg

3061 ttcgtcgtgg agacgcggcg ggctgagcgg ggtgtcgaga gcctcttcgg agggagcaag

3121 tgtgcgggcc gtagcgttaa gcgaactctg cagcctcgtc aaactcacaa cgggagagct

3181 gagccgctca tgtcacggcg aaggccatgt ccggcgagcc ctggtccggg gttagctcgt

3241 cgggtctctc cggggtacgg gagatggcac gtgcacacag tctggttcgg aacaggagag

3301 acccgtctgc cccgccttcg tcgggcaaag accaagggta taagccgatg gtgaaatccc

3361 ttggagggca gcgggagtcc gatggggtcg tagtaccgct gatcggcgtg caacataacg

3421 cgccgggagg gaagggccct gactttgatc acgcgggtga agcgggtaag tgcgagggca

3481 tgaccgggat gtctcggtcc aaccaccccg gcaggcgatt gcctgtcgta gccgacgagg

3541 agccgcttgc ggtgtcgccg gtgaaagtgc gacaactgca acgcacgcta tgggctgcgg

3601 ccaagcagtc gcagggtcgg cgtttccacg ccctgtatga ccgtgtctac aggggtgacg

3661 tcctgtggga ggcgtgggag cgggtgcgta agaacagggg tgcggccggg gtggatcgtg

3721 tcaccttggt cgcggtggag gagtacggcg tggaccgcat gttgcgtgag ttgcgccatg

3781 acctccgcga gggtgtgtac tgtccggcgc cggcgcgtcg ggtggagatc ccgaaaccac

3841 ggggcggtac gcggccgttg gggattccga cggtgcggga ccgggtggcc caggcggcgg

3901 ccaagatcgt gctggaaccg atcttcgagg cggacttcat gtcgtgctcg tatgggtttc

3961 ggccgaaacg gtcggccacg caggcgatgg aacggcttcg tgtcggcttc atcgagggct

4021 cccagtttgt ggtcgagttc gacatcgcca atttcttcgg cgagatcgac cacgaccggc

4081 tactggctga ggtcagcaga cgggtctcgg accggcgggt gctcaaactg ctgcggttgt

4141 ggctgcaggc gggagtgatg gtggacgggg tggtgtcgcg gacggtcgcg ggcactccgc

4201 agggcggggt gatctcgccg ttgttggcca acatctatct gcatgtgctc gacaccgaac

4261 tcgctcgacg caatgtgggt gagttggtgc gctacgccga tgacggtgtg gtgttgtgcc

4321 gcagcgcggc ccaagctgag cacgctctgg cggcggtggg ggagatcctg gcgtcgttgg

4381 ggttgcggct acatccggac aagacgaagg tggtcgacct gcgtgagggc ggtgagggcc

4441 tggactttct gggttgtcac ttccgggcac gtatgtcggg gcggttgtgg gaacagaggc

4501 gcatcgtgcg ctactacctg caccgctggc ccagccaaac ggcgatggtt cgcttgcggg

4561 agaaggttcg tgagcgcacc ggccgtaacc gggtcggatt cgacatccgt gatgtgatcg

4621 cggtgttgaa tccgatcttg cgtggctggg gcaactactt tcgcaccggc aacgccgccg

4681 acaagttccg ccagatcgac cactacgtca cgcggcgcct gaaggagctt ctgatcaaga

4741 agcgcggtcg gaacctgcgt gctggacaag ccgatcagtg gactgaagag tggttcaacg

4801 ggcacggcct gcaccgcctg cgcggcacta tccgctaccc gaaggcagcg taaccatgca

4861 cagaagatca tcggtaagcc gtgtgcggga aaaccgcacg cacggattga aagggggatg

4921 gggaaacgga tccgctctgc ggacaccgcg cccctgacta ccaatg                                       

3' end

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[Intron and flanking sequence]

2641 aatgtcatca ggggcgagat gagtctggtc ggtccgcgtc cggagcgccc ggagtacgtc

2701 gacctgttca acgtccagat cgcccgctac ggtgaccggc accgggtcaa ggccgggatc

2761 accggttggg cgcaggtgca cggcctgcgc gggcagacgt cgatcgccga ccgcgccgag

2821 tgggacaact tctacatcga gaactggtcg gtgttgctgg actggaagat cctggcgatg

2881 accgtcgggg cggtgctgcg ccgggccgag tgagcccggg gcgcgacctt ctcgacattg

2941 cggaccccgc cggtacgctt tggtaccgtt cgggccgtgt tgcgtcctga aagttggact

3001 ggactagcgg gtggaagtcc cgtcccggta ggtaccggag cgccgggtag caggccccgg

3061 ttcgtcgtgg agacgcggcg ggctgagcgg ggtgtcgaga gcctcttcgg agggagcaag

3121 tgtgcgggcc gtagcgttaa gcgaactctg cagcctcgtc aaactcacaa cgggagagct

3181 gagccgctca tgtcacggcg aaggccatgt ccggcgagcc ctggtccggg gttagctcgt

3241 cgggtctctc cggggtacgg gagatggcac gtgcacacag tctggttcgg aacaggagag

3301 acccgtctgc cccgccttcg tcgggcaaag accaagggta taagccgatg gtgaaatccc

3361 ttggagggca gcgggagtcc gatggggtcg tagtaccgct gatcggcgtg caacataacg

3421 cgccgggagg gaagggccct gactttgatc acgcgggtga agcgggtaag tgcgagggca

3481 tgaccgggat gtctcggtcc aaccaccccg gcaggcgatt gcctgtcgta gccgacgagg

3541 agccgcttgc ggtgtcgccg gtgaaagtgc gacaactgca acgcacgcta tgggctgcgg

3601 ccaagcagtc gcagggtcgg cgtttccacg ccctgtatga ccgtgtctac aggggtgacg

3661 tcctgtggga ggcgtgggag cgggtgcgta agaacagggg tgcggccggg gtggatcgtg

3721 tcaccttggt cgcggtggag gagtacggcg tggaccgcat gttgcgtgag ttgcgccatg

3781 acctccgcga gggtgtgtac tgtccggcgc cggcgcgtcg ggtggagatc ccgaaaccac

3841 ggggcggtac gcggccgttg gggattccga cggtgcggga ccgggtggcc caggcggcgg

3901 ccaagatcgt gctggaaccg atcttcgagg cggacttcat gtcgtgctcg tatgggtttc

3961 ggccgaaacg gtcggccacg caggcgatgg aacggcttcg tgtcggcttc atcgagggct

4021 cccagtttgt ggtcgagttc gacatcgcca atttcttcgg cgagatcgac cacgaccggc

4081 tactggctga ggtcagcaga cgggtctcgg accggcgggt gctcaaactg ctgcggttgt

4141 ggctgcaggc gggagtgatg gtggacgggg tggtgtcgcg gacggtcgcg ggcactccgc

4201 agggcggggt gatctcgccg ttgttggcca acatctatct gcatgtgctc gacaccgaac

4261 tcgctcgacg caatgtgggt gagttggtgc gctacgccga tgacggtgtg gtgttgtgcc

4321 gcagcgcggc ccaagctgag cacgctctgg cggcggtggg ggagatcctg gcgtcgttgg

4381 ggttgcggct acatccggac aagacgaagg tggtcgacct gcgtgagggc ggtgagggcc

4441 tggactttct gggttgtcac ttccgggcac gtatgtcggg gcggttgtgg gaacagaggc

4501 gcatcgtgcg ctactacctg caccgctggc ccagccaaac ggcgatggtt cgcttgcggg

4561 agaaggttcg tgagcgcacc ggccgtaacc gggtcggatt cgacatccgt gatgtgatcg

4621 cggtgttgaa tccgatcttg cgtggctggg gcaactactt tcgcaccggc aacgccgccg

4681 acaagttccg ccagatcgac cactacgtca cgcggcgcct gaaggagctt ctgatcaaga

4741 agcgcggtcg gaacctgcgt gctggacaag ccgatcagtg gactgaagag tggttcaacg

4801 ggcacggcct gcaccgcctg cgcggcacta tccgctaccc gaaggcagcg taaccatgca

4861 cagaagatca tcggtaagcc gtgtgcggga aaaccgcacg cacggattga aagggggatg

4921 gggaaacgga tccgctctgc ggacaccgcg cccctgacta ccaatggatc gtgtcaacgc

4981 gttcggcgac gacgccctgg gtgacctcga cgccgtcggt ctggtggacg aactgcgccg

5041 cggggcggtg tcggcgagcg aactcgtcga ggccgcgatc gcgcgcaccg agaaggcgaa

5101 cccggcgctg aacggactca ccttcgaggc atacgagcgg gccaggacgc gggcccgact

5161 gcaccgcccc tacggtggct tcttcgacgg ggtgccgtcg ttcgtcaagg acaacgtggc

5221 cgtcgccggg atgccggcga tgaacggcac cgacgcctgg gagcccgtcc ccgccgccca

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[ORF sequence]

MVKSLGGQRESDGVVVPLIGVQHNAPGGKGPDFDHAGEAGKCEGMTGMSRSNHPGRRL

PVVADEEPLAVSPVKVRQLQRTLWAAAKQSQGRRFHALYDRVYRGDVLWEAWERVRKN

RGAAGVDRVTLVAVEEYGVDRMLRELRHDLREGVYCPAPARRVEIPKPRGGTRPLGIP

TVRDRVAQAAAKIVLEPIFEADFMSCSYGFRPKRSATQAMERLRVGFIEGSQFVVEFD

IANFFGEIDHDRLLAEVSRRVSDRRVLKLLRLWLQAGVMVDGVVSRTVAGTPQGGVIS

PLLANIYLHVLDTELARRNVGELVRYADDGVVLCRSAAQAEHALAAVGEILASLGLRL

HPDKTKVVDLREGGEGLDFLGCHFRARMSGRLWEQRRIVRYYLHRWPSQTAMVRLREK

VRERTGRNRVGFDIRDVIAVLNPILRGWGNYFRTGNAADKFRQIDHYVTRRLKELLIK

KRGRNLRAGQADQWTEEWFNGHGLHRLRGTIRYPKAA

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[Secondary structure]

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| Introduction | Intron secondary structure | Intron ORF structure | Introns listed by organism | Bacterial intron fragments | Alignment of insertion sequence |

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