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Information of N.sp.I4 intron (Format of information for each intron)
[Intron and flanking sequence]
Sequence
from Genbank entry. Intron is identified in red.
The ORF
is identified in blue with start and stop codons
underlined.
5' end
gtgtgattc gttctgtcga aacgagtaga aatattcggg gatgacaggc aagggaaata
45481 ttcgggagaa attccgacag aaccttgaca actcaatttt tcgtgatggt gaaattccat
45541 ccctccaagt gcaggagtga aagcaagtcc cccatttcag caaaagtggt tctttgttgg
45601 gatgaagcgg ggaatcatgg cggtaactgc aagcctaatg tggaatcccg cctagcatag
45661 ctggtcatgg atagtcaaac gaatctcttg attgaatcat cgttatgcaa aacaagccaa
45721 aaggctgaca ggcttgtccc aaaagggaaa agattagtgg ttggctgatt agcgacagac
45781 caataagcac tcacaataaa ctcggtgaag agagagagtc ctaaaaccaa cgtcaaacga
45841 aaaattggga acgaagtaac cccctaatgt actctccaaa actggtcgaa ctttggagta
45901 ggtagccaac cggaagtcat cagggggagg gattgcctca gaagcgaatg cctccttgta
45961 acgagaagga tatgcagacg gaggcacggt gacttggatt gtagaggtgc aagtagcaat
46021 gtatacatct aaaacgagtt tcaagactac ggtggaatgg aatgctatcc cctggcaaaa
46081 gctagaaagg aaagtattta agttacaaaa gcgcatctac aaagcctcgc agcgtggcga
46141 tgtcaaagca gttcgtcaac tccaaaaaac gttgttgcac tcctggtcag caaagtgttt
46201 agcggttcgt cgggtaacac aggacaaccg aggtaagaag acggcaggag tggatgggcg
46261 gaaaaacctc tccccaaaag cacgtctcat cttagtacaa tccatgaagc taggtgataa
46321 agcctctccc acccgcaggg tgtggattcc gaaacctggc tcatcaggcg aaaaaagacc
46381 cctttctata cccactctat acgaccgcgc cttgcaatcg ctagtaaaac tagccttaga
46441 acccgaatgg gaagctcgct tcgagccaaa ctcgtttggt tttcgacctg gaagaaacgc
46501 ccatgatgca atgaaggcaa tattcaacac tattaagttc aaacctaaat atgttttgga
46561 tgctgatatt gcaaaatgtt ttgacaaaat tgatcataat gttctgctgt caaaattaaa
46621 tacattcccc accatcagcc gacaaattcg tgcatggtta aaagcgggag tgattgattt
46681 ctccgaatat gctttgaggg agaaatctga ccacacaaca tcgatgggtg ttccacaagg
46741 gggtacaatt tcgccgctat tagcgaatat agccctccac ggcatggaaa accgaattaa
46801 acaagttgct ctaaccttac ccggatgtaa atctgagaat cgtcaagcaa taagcttaat
46861 cagatttgca gatgattttg tcatcctgca caaagacctc gccgttatcc aaagatgtca
46921 gcagattatt agtgaatggt taagcgagtt ggggctggaa ttgaagccaa gtaaaacccg
46981 aatatcccat acacttaata tgtatgaagg taaggttggt tttgattttc taggtttcac
47041 tgttcgacaa tttcctgtag gaaaatatca cagtggtaaa agctcaagtg gaaaattact
47101 tggttacaaa actctgatta ccccaagtaa agcaaagctg aagatacacg cgcagaagat
47161 aggtaaattg attgatgagc ataaggcagt accacaatct gatttaatcg ctcatttgaa
47221 tcccgtcatc cgtggatgga caaactacta ctcatgtgtc gtcagtaaac gcatatttaa
47281 ccaggctgat acaacattat ttagtcagct aaaagcatgg gcagaacatc gtcaccctaa
47341 taaatcttcc cgatggagtt gtcaaaagta ttggcaaacc gtagggtctg ataattgggt
47401 atttaaaccc cataaccaga aaattcgcct actcaagcac cgtgaaactc gcattgtgag
47461 acacatacag gtgaaaggaa gccgtagccc gtttgatggt gactgggtgt actggagttc
47521 cagaatgggt aaacatcccg aagccccaat cagggtggca acactcctga aaatgcagaa
47581 aggaaagtgt actcactgtg gactgttttt tcaccatgaa gatttgatgg aaatcgacca
47641 taaaatcccc cgctctcaag gcggtaagga tagttatgac aaccttcaat tacttcatgg
47701 acattgccat gatgctaaaa cggcagaaga taaatgtgct gttacagttc cagagctaga
47761 tgaggattat ctcaacctta atccctttta actctgaact tagaggtgtg catgataagc
47821 accaaatcat tgaggagccg tgtgaaatta acgtttcacg cacggttttg tagccgagtc
47881 agggaggtga ctttctggct taggcat
3' end
[Intron and flanking sequence]
45001 atgcaactga gccaggatta tttgcaacca acctgcaatc atcggtttga gccaggatta
45061 tctgcaacta taaaagtaaa aaaaacgaac ggttttttaa ctgcgtcacc agtaaggctt
45121 agagttactt ttaccgttgg tttttaagta aaaaaactcg gtaaagaatt caaagttaat
45181 ttataaaatt ctcaaatgag ttttttgaca aactcctgtc aaggagagaa aacttagtca
45241 tagtaaagtg ttgagcttat ttgcaattaa tcctggtcga aacggatgat tgcaggctgg
45301 ttgcatttaa tcctggctca gttgcagtta atcctggttc aaatgaaatt atagttgcaa
45361 ttaatcctgg ctgaaaacag tgatgattgc aggtctgagc gattagcatt gcaggtcgct
45421 agtgtgattc gttctgtcga aacgagtaga aatattcggg gatgacaggc aagggaaata
45481 ttcgggagaa attccgacag aaccttgaca actcaatttt tcgtgatggt gaaattccat
45541 ccctccaagt gcaggagtga aagcaagtcc cccatttcag caaaagtggt tctttgttgg
45601 gatgaagcgg ggaatcatgg cggtaactgc aagcctaatg tggaatcccg cctagcatag
45661 ctggtcatgg atagtcaaac gaatctcttg attgaatcat cgttatgcaa aacaagccaa
45721 aaggctgaca ggcttgtccc aaaagggaaa agattagtgg ttggctgatt agcgacagac
45781 caataagcac tcacaataaa ctcggtgaag agagagagtc ctaaaaccaa cgtcaaacga
45841 aaaattggga acgaagtaac cccctaatgt actctccaaa actggtcgaa ctttggagta
45901 ggtagccaac cggaagtcat cagggggagg gattgcctca gaagcgaatg cctccttgta
45961 acgagaagga tatgcagacg gaggcacggt gacttggatt gtagaggtgc aagtagcaat
46021 gtatacatct aaaacgagtt tcaagactac ggtggaatgg aatgctatcc cctggcaaaa
46081 gctagaaagg aaagtattta agttacaaaa gcgcatctac aaagcctcgc agcgtggcga
46141 tgtcaaagca gttcgtcaac tccaaaaaac gttgttgcac tcctggtcag caaagtgttt
46201 agcggttcgt cgggtaacac aggacaaccg aggtaagaag acggcaggag tggatgggcg
46261 gaaaaacctc tccccaaaag cacgtctcat cttagtacaa tccatgaagc taggtgataa
46321 agcctctccc acccgcaggg tgtggattcc gaaacctggc tcatcaggcg aaaaaagacc
46381 cctttctata cccactctat acgaccgcgc cttgcaatcg ctagtaaaac tagccttaga
46441 acccgaatgg gaagctcgct tcgagccaaa ctcgtttggt tttcgacctg gaagaaacgc
46501 ccatgatgca atgaaggcaa tattcaacac tattaagttc aaacctaaat atgttttgga
46561 tgctgatatt gcaaaatgtt ttgacaaaat tgatcataat gttctgctgt caaaattaaa
46621 tacattcccc accatcagcc gacaaattcg tgcatggtta aaagcgggag tgattgattt
46681 ctccgaatat gctttgaggg agaaatctga ccacacaaca tcgatgggtg ttccacaagg
46741 gggtacaatt tcgccgctat tagcgaatat agccctccac ggcatggaaa accgaattaa
46801 acaagttgct ctaaccttac ccggatgtaa atctgagaat cgtcaagcaa taagcttaat
46861 cagatttgca gatgattttg tcatcctgca caaagacctc gccgttatcc aaagatgtca
46921 gcagattatt agtgaatggt taagcgagtt ggggctggaa ttgaagccaa gtaaaacccg
46981 aatatcccat acacttaata tgtatgaagg taaggttggt tttgattttc taggtttcac
47041 tgttcgacaa tttcctgtag gaaaatatca cagtggtaaa agctcaagtg gaaaattact
47101 tggttacaaa actctgatta ccccaagtaa agcaaagctg aagatacacg cgcagaagat
47161 aggtaaattg attgatgagc ataaggcagt accacaatct gatttaatcg ctcatttgaa
47221 tcccgtcatc cgtggatgga caaactacta ctcatgtgtc gtcagtaaac gcatatttaa
47281 ccaggctgat acaacattat ttagtcagct aaaagcatgg gcagaacatc gtcaccctaa
47341 taaatcttcc cgatggagtt gtcaaaagta ttggcaaacc gtagggtctg ataattgggt
47401 atttaaaccc cataaccaga aaattcgcct actcaagcac cgtgaaactc gcattgtgag
47461 acacatacag gtgaaaggaa gccgtagccc gtttgatggt gactgggtgt actggagttc
47521 cagaatgggt aaacatcccg aagccccaat cagggtggca acactcctga aaatgcagaa
47581 aggaaagtgt actcactgtg gactgttttt tcaccatgaa gatttgatgg aaatcgacca
47641 taaaatcccc cgctctcaag gcggtaagga tagttatgac aaccttcaat tacttcatgg
47701 acattgccat gatgctaaaa cggcagaaga taaatgtgct gttacagttc cagagctaga
47761 tgaggattat ctcaacctta atccctttta actctgaact tagaggtgtg catgataagc
47821 accaaatcat tgaggagccg tgtgaaatta acgtttcacg cacggttttg tagccgagtc
47881 agggaggtga ctttctggct taggcatcca cctaaaaact gctgttctcc tgggtatgga
47941 aaaaaatcca ttgctaccaa caaagttaac atctcactat ctgtgaatct cggcgatggc
48001 cctggcaata acggtacata acggtagcct ttttgctgat accaatcatc tactagcaca
48061 aaaattgtcg tcaacagggt cgaaccgtct accatattca ttgggagacc tcaagctttg
48121 gtgtcgttac ctttatcttg cggtttcccc ttctttttta ctaccccaac tcacataagc
48181 cgtactttat aacaagttag ctggttggca acccaacaag ttgacaagtc ggctggttat
MTWIVEVQVAMYTSKTSFKTTVEWNAIPWQKLERKVFKLQKRIYKASQRGDVKAVRQL
QKTLLHSWSAKCLAVRRVTQDNRGKKTAGVDGRKNLSPKARLILVQSMKLGDKASPTR
RVWIPKPGSSGEKRPLSIPTLYDRALQSLVKLALEPEWEARFEPNSFGFRPGRNAHDA
MKAIFNTIKFKPKYVLDADIAKCFDKIDHNVLLSKLNTFPTISRQIRAWLKAGVIDFS
EYALREKSDHTTSMGVPQGGTISPLLANIALHGMENRIKQVALTLPGCKSENRQAISL
IRFADDFVILHKDLAVIQRCQQIISEWLSELGLELKPSKTRISHTLNMYEGKVGFDFL
GFTVRQFPVGKYHSGKSSSGKLLGYKTLITPSKAKLKIHAQKIGKLIDEHKAVPQSDL
IAHLNPVIRGWTNYYSCVVSKRIFNQADTTLFSQLKAWAEHRHPNKSSRWSCQKYWQT
VGSDNWVFKPHNQKIRLLKHRETRIVRHIQVKGSRSPFDGDWVYWSSRMGKHPEAPIR
VATLLKMQKGKCTHCGLFFHHEDLMEIDHKIPRSQGGKDSYDNLQLLHGHCHDAKTAE
DKCAVTVPELDEDYLNLNPF

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