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Information for Ps.tu.I1-1 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

353461 gtgcgtcaag cgaagcttga tgcatcttgc agggtgcaag tccctgtcgg gtaaggttta
353521 actcaccacc cgtatcgagt gttgcgccta tggcggagct gttttttttt cagcgaacaa
353581 gataggtgaa gcgtacacag agaattaagt aggccacagg ggatccgtgt ccctgaagtg
353641 ctgagatcgc tccgataaat acagtctgac tgacgaggtt tgtaacgcca ctgaagtcca
353701 agcaaagcaa ccgtaatgag tgaggttgtg gcgagtcagc ggagttatta agccgtggca
353761 tgtttaaaga gatgcatcag gaacttgaga gagccaaagg tgttccgcaa ggacgcggta
353821 gggaagctaa gtcaaaagca aggccaacga tgaccctttg gcagtcagac cagttcgtag
353881 tagtttgaga cgggaaagcc gatcacatgg cgaaggggct ggcagttata tcacgtgttt
353941 agcagacaca taggccggac aatgtagggc tggactcact atgataaccg aactaaacgc
354001 gatcacattt aaatcacagc gccaccccaa acacaggttt cagaacttat acggattact
354061 aagggaagat ttcctgtatc aaagttgggg tcagctcaat aaacaagcag ccgctggtat
354121 tgatggcatc accatgcctg cttatcagca gcaacttgtt ggcaacatta ctcgactgag
354181 cgatgccctg aagcataagc gctttcgagc caatgacatc aaacgtgtct ttattcccaa
354241 agcaaatggc aaacagagac cgctgggctt gcccacggtg gatgataaat tggtgcaaca
354301 aggcgtgagc cagatattgc aaagtatctg ggaagcggat tttctgccca atagctatgg
354361 ctaccgaccg aataaaagcg cccatcaagc gttgcacagt ttagcgttga atcttcagtt
354421 taaaggatac ggttacattg tggaggctga cattaaaggc ttcttcaaca accttgatca
354481 caactggctg atgaagatgc tcaaacaacg cattgatgac aaagccatgc tgagtttaat
354541 cagccaatgg cttaaagccc gcataaaatc acctgaaggg gtatttgaat acccgaaaag
354601 cggtacgccg caagggggga tcattagccc ggtactggcg aacatctacc tgcattacgc
354661 actcgactta tggtttgaaa agaaagtaaa accccgaatg cgtggccgcg cgatgctcat
354721 ccggtacgcc gatgattttg tgtgtgcgtt tcagtacgcc aacgatgctg agcgatttta
354781 cgaggtgctg ccaaaacgac ttaagaaatt caatttagaa gtggcagagg agaaaacctc
354841 actgctacga tttagtcgat ttcacccgag tcgaaaacgg caatttgtgt ttcttggttt
354901 tgccttttac tgggcaaaag atgcacaggg aaaacctcga ctcaggcggc gaacaggggc
354961 ggaaaagcac cgcgccagca tgagcgagtt ttaccaatac atcaaagtca agcggtcaaa
355021 caagctcaac acttggatgc cgcaactgaa acgcaaactg atgggatacc gaaattactt
355081 tggcctgcca gacaacagct gcagccttga tagattgtac agttatgtgt tgcacagttt
355141 atacaaatgg ctgaataggc gcagtggcag acgcagttac aattggagta atttcaagaa
355201 gatgctaatg tattatgcaa ttgagcgacc aagagtgagt aagcgattta ttcacgtaga
355261 ttggtactag gagcgtgttg atttacacgc gtgaatatat aactgaagag ccggatgcgg
355321 taattccgca cgtccggatc tgtgtggggt cggcccagta atgggtcgct ctaccacgat

3' end

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[Intron and flanking sequence]

353161 tgagcatcaa ctcttagcgc ttatcaataa agcgtctgtt gttgtcatag ggccaggact
353221 tggtcaggat gtttgggcac agaatatttg gcaatggatg atgaatgcgc agtgcttgcg
353281 tttagtaatt gatgcagatg gattaaattt tttagcaaaa agtgataaat gcaccacgga
353341 taacttaact gagagagtat tgactccaca cgctggtgag gctgcaagat tattggggat
353401 atcaaacaga gacgttgaac aagaccgttt tgattctgcg ctacaattaa gtcagcgtta
353461 gtgcgtcaag cgaagcttga tgcatcttgc agggtgcaag tccctgtcgg gtaaggttta
353521 actcaccacc cgtatcgagt gttgcgccta tggcggagct gttttttttt cagcgaacaa
353581 gataggtgaa gcgtacacag agaattaagt aggccacagg ggatccgtgt ccctgaagtg
353641 ctgagatcgc tccgataaat acagtctgac tgacgaggtt tgtaacgcca ctgaagtcca
353701 agcaaagcaa ccgtaatgag tgaggttgtg gcgagtcagc ggagttatta agccgtggca
353761 tgtttaaaga gatgcatcag gaacttgaga gagccaaagg tgttccgcaa ggacgcggta
353821 gggaagctaa gtcaaaagca aggccaacga tgaccctttg gcagtcagac cagttcgtag
353881 tagtttgaga cgggaaagcc gatcacatgg cgaaggggct ggcagttata tcacgtgttt
353941 agcagacaca taggccggac aatgtagggc tggactcact atgataaccg aactaaacgc
354001 gatcacattt aaatcacagc gccaccccaa acacaggttt cagaacttat acggattact
354061 aagggaagat ttcctgtatc aaagttgggg tcagctcaat aaacaagcag ccgctggtat
354121 tgatggcatc accatgcctg cttatcagca gcaacttgtt ggcaacatta ctcgactgag
354181 cgatgccctg aagcataagc gctttcgagc caatgacatc aaacgtgtct ttattcccaa
354241 agcaaatggc aaacagagac cgctgggctt gcccacggtg gatgataaat tggtgcaaca
354301 aggcgtgagc cagatattgc aaagtatctg ggaagcggat tttctgccca atagctatgg
354361 ctaccgaccg aataaaagcg cccatcaagc gttgcacagt ttagcgttga atcttcagtt
354421 taaaggatac ggttacattg tggaggctga cattaaaggc ttcttcaaca accttgatca
354481 caactggctg atgaagatgc tcaaacaacg cattgatgac aaagccatgc tgagtttaat
354541 cagccaatgg cttaaagccc gcataaaatc acctgaaggg gtatttgaat acccgaaaag
354601 cggtacgccg caagggggga tcattagccc ggtactggcg aacatctacc tgcattacgc
354661 actcgactta tggtttgaaa agaaagtaaa accccgaatg cgtggccgcg cgatgctcat
354721 ccggtacgcc gatgattttg tgtgtgcgtt tcagtacgcc aacgatgctg agcgatttta
354781 cgaggtgctg ccaaaacgac ttaagaaatt caatttagaa gtggcagagg agaaaacctc
354841 actgctacga tttagtcgat ttcacccgag tcgaaaacgg caatttgtgt ttcttggttt
354901 tgccttttac tgggcaaaag atgcacaggg aaaacctcga ctcaggcggc gaacaggggc
354961 ggaaaagcac cgcgccagca tgagcgagtt ttaccaatac atcaaagtca agcggtcaaa
355021 caagctcaac acttggatgc cgcaactgaa acgcaaactg atgggatacc gaaattactt
355081 tggcctgcca gacaacagct gcagccttga tagattgtac agttatgtgt tgcacagttt
355141 atacaaatgg ctgaataggc gcagtggcag acgcagttac aattggagta atttcaagaa
355201 gatgctaatg tattatgcaa ttgagcgacc aagagtgagt aagcgattta ttcacgtaga
355261 ttggtactag gagcgtgttg atttacacgc gtgaatatat aactgaagag ccggatgcgg
355321 taattccgca cgtccggatc tgtgtggggt cggcccagta atgggtcgct ctaccacgat
355381 taatgcaatt agcttgttaa aaggtcctgg cagtctggta tctgcaaagg gttgtttgaa
355441 tattaatcaa acgggcagtg cagctcttgc aagtgctggg atgggagatg ttttatctgg
355501 tattattgcg gggcttatgg ctcagcagat gacaggtttt actgcaacca agcttgcagc
355561 ggccattcat ggtgctgctg cggataattt acttgatgaa ggtgctcgag ggttattggc
355621 aagtgactta tttcctcaga tcagacgatt aattggctaa ttaaagagtg atgaacatgt
355681 ttgaaaaaaa gctagaaaat gaattagcga ctgttgctat gggcaatgct ttggctgagg

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[ORF sequence]

MITELNAITFKSQRHPKHRFQNLYGLLREDFLYQSWGQLNKQAAAGIDGITMPAYQQQ

LVGNITRLSDALKHKRFRANDIKRVFIPKANGKQRPLGLPTVDDKLVQQGVSQILQSI

WEADFLPNSYGYRPNKSAHQALHSLALNLQFKGYGYIVEADIKGFFNNLDHNWLMKML

KQRIDDKAMLSLISQWLKARIKSPEGVFEYPKSGTPQGGIISPVLANIYLHYALDLWF

EKKVKPRMRGRAMLIRYADDFVCAFQYANDAERFYEVLPKRLKKFNLEVAEEKTSLLR

FSRFHPSRKRQFVFLGFAFYWAKDAQGKPRLRRRTGAEKHRASMSEFYQYIKVKRSNK

LNTWMPQLKRKLMGYRNYFGLPDNSCSLDRLYSYVLHSLYKWLNRRSGRRSYNWSNFK

KMLMYYAIERPRVSKRFIHVDWY

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[Secondary structure]

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| Introduction | Intron secondary structure | Intron ORF structure | Introns listed by organism | Bacterial intron fragments | Alignment of insertion sequence |

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