Sc.s.I1

Sequence from Genbank entry (intron is on the antisense strand).

The boundaries of the intron are marked as red and ORF is marked

as blue, with start and stop codons underlined.

Intron on antisense strand

3' end
gtaggc
841 taagtaccca gcgccttacc gtattactac ggcaggtttc caaatactcg cccccgaacc
901 gtacgtacac ctttcaatgt atacggctct ccatttataa actcaatcta acttgccata
961 atgtaatttc ttatggcaat ctttacacaa tgctattgtt ttccgttgtc tagaaatcat
1021 caaacgttcc caaaaagtct ttttctttaa atccttgagt tttctcacat gatgaatttc
1081 aatgagacta ttggtagctt gacagtactc acaacggttt gcttttaatc tatcaattaa
1141 attggttcgg ctaaaatatt ttgccgtatt tggtaaatta tcattttcta ggaaagattt
1201 cttttgacgt ttaaagcctc cattatagaa ataacgggtc attgtatctc ctttacgtcc
1261 aatatactgt atcctgaatt gaccatcctt tttatattta cggatgatgt gagatttagt
1321 cgtacgatac ttggtcgcat aggttttata catgctatat tccataatat acttaaagcg
1381 atggaggata gaactgttgt tagcgataca ataatagtta taaaaacctc ttatttctgc
1441 attgtagcgt tctaaaatct ctaaatcatc acagtctttc ataaaataac gagctgttgg
1501 tttccaaact tcgtgacctc tatgataagt cattttcata gccccatagg acagcaatct
1561 atctcgaatc gtttcaatag aaacctctaa aaccaatcta cctgtataat ttctgaccaa
1621 tcgtcctgac gaatcacgtt tggctaaatt ggattggcga atgtacagat gataacccag
1681 aaacctcgct ttatctcttg cattggtaat cagggttttc tcttcagaga gttccaattt
1741 gagaaccgtt tccaaatagt ccttaatgtc tgctttaata cgacgagcgt cctctttact
1801 tccaatcaca ccacagataa aatcatctgc atatcgggta taggttagac gcttaaaact
1861 actatccata gggtcgctat gaggaatcaa tactctttct ttttctaatt gacgaatacg
1921 ttgaatggct tcttggcgtt ggttttccgt cgaagtacac tctagtgttc ttcttgcttt
1981 tcccagtgca atctcatttt ggcgatattc tggggtacgt ttacggtatt tcccttcaca
2041 gaagttcttc acataatctg tcatatattt atcaaactta tccaaataga tattggctag
2101 aattggactg attattcctc cttgtggagt tcctgagtag gttttgtaga atttccaatc
2161 ttccacatat cctgcattga gaaatttacg aatcaggcgt aagaaacgct catccgtaat
2221 tctttctcgt agaatttgaa ttatcacatc gtggttgata ttatcaaaaa acgatttgat
2281 atctccttca ataaaccact ttactcctgt ataggttttc tgaatttgag taagtgctga
2341 atgacagctt ttattcggac gaaaaccatg ggaagaggat tcaaattgtc cctcgtagat
2401 ggattccaaa atcattttga taacctgttg taagagctta tcatcaaatg atggaatacc
2461 tagtggacgt ggcttcccat tctttttagg aatataggtt cgtcttgatg gatgtggctg
2521 ataagattca tctttcaggg aatcaatcaa ttggtcaatt ctagccatac tcataccatc
2581 aatcgtcaac tcatctactc caggtgtcat gtgtcctggg ttagcgtaaa tcgtttgata
2641 ggcaactaag tacatttctt tgttgtaaag taagcgataa agtcgctcaa attgatagtt
2701 tttatcttta ctgtgttttg ttagattgtt taacacattt tgaggatttc tcatggtgtc
2761 tcacacacct tcctttccat aatgttaatg ttataaactg ttccccttcg ccatgtacgt
2821 gccattaaca cgctcgaact actacgggaa ctccgttacc ttatcaaata ttcataaacc
2881 tgatgtttaa tagcttttac aagcattttg acttaggtaa tctccgttta gctggtatag
2941 taacatagct tgataatttc atcggatagg acgttcatct gttttcattt actatgaata
3001 cgctatggaa tccctttgct tcactacctc gaacagtgat aatgaagttc catagtatga
3061 gggttttagt tatcttacct cacagtcccg acacagaccg tttagactat ccttcaatca
3121 gtttagattt tatccttata attatctcag taacaactgt tacattgtca tctcctcatt
3181 cagtcgtgat gtgataactc atcaacttat gagtttccca acgtgctttg ttccctgata
3241 tttggtttcc ctcacaggtc agttgggtga tgataggcat taaggtcacg cctactactt
3301 tgccaaaaag tagatttact ataccgcctt tacggacgca c

5' end

Intron on sense strand

5' end

1 gtgcgtccgt aaaggcggta tagtaaatct actttttggc aaagtagtag gcgtgacctt

61 aatgcctatc atcacccaac tgacctgtga gggaaaccaa atatcaggga acaaagcacg

121 ttgggaaact cataagttga tgagttatca catcacgact gaatgaggag atgacaatgt

181 aacagttgtt actgagataa ttataaggat aaaatctaaa ctgattgaag gatagtctaa

241 acggtctgtg tcgggactgt gaggtaagat aactaaaacc ctcatactat ggaacttcat

301 tatcactgtt cgaggtagtg aagcaaaggg attccatagc gtattcatag taaatgaaaa

361 cagatgaacg tcctatccga tgaaattatc aagctatgtt actataccag ctaaacggag

421 attacctaag tcaaaatgct tgtaaaagct attaaacatc aggtttatga atatttgata

481 aggtaacgga gttcccgtag tagttcgagc gtgttaatgg cacgtacatg gcgaagggga

541 acagtttata acattaacat tatggaaagg aaggtgtgtg agacaccatg agaaatcctc

601 aaaatgtgtt aaacaatcta acaaaacaca gtaaagataa aaactatcaa tttgagcgac

661 tttatcgctt actttacaac aaagaaatgt acttagttgc ctatcaaacg atttacgcta

721 acccaggaca catgacacct ggagtagatg agttgacgat tgatggtatg agtatggcta

781 gaattgacca attgattgat tccctgaaag atgaatctta tcagccacat ccatcaagac

841 gaacctatat tcctaaaaag aatgggaagc cacgtccact aggtattcca tcatttgatg

901 ataagctctt acaacaggtt atcaaaatga ttttggaatc catctacgag ggacaatttg

961 aatcctcttc ccatggtttt cgtccgaata aaagctgtca ttcagcactt actcaaattc

1021 agaaaaccta tacaggagta aagtggttta ttgaaggaga tatcaaatcg ttttttgata

1081 atatcaacca cgatgtgata attcaaattc tacgagaaag aattacggat gagcgtttct

1141 tacgcctgat tcgtaaattt ctcaatgcag gatatgtgga agattggaaa ttctacaaaa

1201 cctactcagg aactccacaa ggaggaataa tcagtccaat tctagccaat atctatttgg

1261 ataagtttga taaatatatg acagattatg tgaagaactt ctgtgaaggg aaataccgta

1321 aacgtacccc agaatatcgc caaaatgaga ttgcactggg aaaagcaaga agaacactag

1381 agtgtacttc gacggaaaac caacgccaag aagccattca acgtattcgt caattagaaa

1441 aagaaagagt attgattcct catagcgacc ctatggatag tagttttaag cgtctaacct

1501 atacccgata tgcagatgat tttatctgtg gtgtgattgg aagtaaagag gacgctcgtc

1561 gtattaaagc agacattaag gactatttgg aaacggttct caaattggaa ctctctgaag

1621 agaaaaccct gattaccaat gcaagagata aagcgaggtt tctgggttat catctgtaca

1681 ttcgccaatc caatttagcc aaacgtgatt cgtcaggacg attggtcaga aattatacag

1741 gtagattggt tttagaggtt tctattgaaa cgattcgaga tagattgctg tcctatgggg

1801 ctatgaaaat gacttatcat agaggtcacg aagtttggaa accaacagct cgttatttta

1861 tgaaagactg tgatgattta gagattttag aacgctacaa tgcagaaata agaggttttt

1921 ataactatta ttgtatcgct aacaacagtt ctatcctcca tcgctttaag tatattatgg

1981 aatatagcat gtataaaacc tatgcgacca agtatcgtac gactaaatct cacatcatcc

2041 gtaaatataa aaaggatggt caattcagga tacagtatat tggacgtaaa ggagatacaa

2101 tgacccgtta tttctataat ggaggcttta aacgtcaaaa gaaatctttc ctagaaaatg

2161 ataatttacc aaatacggca aaatatttta gccgaaccaa tttaattgat agattaaaag

2221 caaaccgttg tgagtactgt caagctacca atagtctcat tgaaattcat catgtgagaa

2281 aactcaagga tttaaagaaa aagacttttt gggaacgttt gatgatttct agacaacgga

2341 aaacaatagc attgtgtaaa gattgccata agaaattaca ttatggcaag ttagattgag

2401 tttataaatg gagagccgta tacattgaaa ggtgtacgta cggttcgggg gcgagtattt

2461 ggaaacctgc cgtagtaata cggtaaggcg ctgggtactt agcctac

3' end

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[Intron and flanking sequence]

481 taatagggag gtgcttctcg ctataggaaa tggtatggcg atactcgtct ttggagcgat
541 taaaggcgcg tttttgattt tctaaaactg tcagttcatt ttccaactcc attttgagct
601 taaggtaggg attaccagtg gctaaagcct taaagtcaga agcagtcatg gtttgttcat
661 caatgtcttc agctgatctc acaggatctt ttgaggtcat tatctgcgta atgtatttga
721 gcttattctc ctgtgtctgc cagaggtaat tgtcgaagct ccctttagta atatagtgat
781 aaatatctac ctcctggtgc atgtttccct gacgaatcaa tctaccattt cgctgtaggc
841 taagtaccca gcgccttacc gtattactac ggcaggtttc caaatactcg cccccgaacc
901 gtacgtacac ctttcaatgt atacggctct ccatttataa actcaatcta acttgccata
961 atgtaatttc ttatggcaat ctttacacaa tgctattgtt ttccgttgtc tagaaatcat
1021 caaacgttcc caaaaagtct ttttctttaa atccttgagt tttctcacat gatgaatttc
1081 aatgagacta ttggtagctt gacagtactc acaacggttt gcttttaatc tatcaattaa
1141 attggttcgg ctaaaatatt ttgccgtatt tggtaaatta tcattttcta ggaaagattt
1201 cttttgacgt ttaaagcctc cattatagaa ataacgggtc attgtatctc ctttacgtcc
1261 aatatactgt atcctgaatt gaccatcctt tttatattta cggatgatgt gagatttagt
1321 cgtacgatac ttggtcgcat aggttttata catgctatat tccataatat acttaaagcg
1381 atggaggata gaactgttgt tagcgataca ataatagtta taaaaacctc ttatttctgc
1441 attgtagcgt tctaaaatct ctaaatcatc acagtctttc ataaaataac gagctgttgg
1501 tttccaaact tcgtgacctc tatgataagt cattttcata gccccatagg acagcaatct
1561 atctcgaatc gtttcaatag aaacctctaa aaccaatcta cctgtataat ttctgaccaa
1621 tcgtcctgac gaatcacgtt tggctaaatt ggattggcga atgtacagat gataacccag
1681 aaacctcgct ttatctcttg cattggtaat cagggttttc tcttcagaga gttccaattt
1741 gagaaccgtt tccaaatagt ccttaatgtc tgctttaata cgacgagcgt cctctttact
1801 tccaatcaca ccacagataa aatcatctgc atatcgggta taggttagac gcttaaaact
1861 actatccata gggtcgctat gaggaatcaa tactctttct ttttctaatt gacgaatacg
1921 ttgaatggct tcttggcgtt ggttttccgt cgaagtacac tctagtgttc ttcttgcttt
1981 tcccagtgca atctcatttt ggcgatattc tggggtacgt ttacggtatt tcccttcaca
2041 gaagttcttc acataatctg tcatatattt atcaaactta tccaaataga tattggctag
2101 aattggactg attattcctc cttgtggagt tcctgagtag gttttgtaga atttccaatc
2161 ttccacatat cctgcattga gaaatttacg aatcaggcgt aagaaacgct catccgtaat
2221 tctttctcgt agaatttgaa ttatcacatc gtggttgata ttatcaaaaa acgatttgat
2281 atctccttca ataaaccact ttactcctgt ataggttttc tgaatttgag taagtgctga
2341 atgacagctt ttattcggac gaaaaccatg ggaagaggat tcaaattgtc cctcgtagat
2401 ggattccaaa atcattttga taacctgttg taagagctta tcatcaaatg atggaatacc
2461 tagtggacgt ggcttcccat tctttttagg aatataggtt cgtcttgatg gatgtggctg
2521 ataagattca tctttcaggg aatcaatcaa ttggtcaatt ctagccatac tcataccatc
2581 aatcgtcaac tcatctactc caggtgtcat gtgtcctggg ttagcgtaaa tcgtttgata
2641 ggcaactaag tacatttctt tgttgtaaag taagcgataa agtcgctcaa attgatagtt
2701 tttatcttta ctgtgttttg ttagattgtt taacacattt tgaggatttc tcatggtgtc
2761 tcacacacct tcctttccat aatgttaatg ttataaactg ttccccttcg ccatgtacgt
2821 gccattaaca cgctcgaact actacgggaa ctccgttacc ttatcaaata ttcataaacc
2881 tgatgtttaa tagcttttac aagcattttg acttaggtaa tctccgttta gctggtatag
2941 taacatagct tgataatttc atcggatagg acgttcatct gttttcattt actatgaata
3001 cgctatggaa tccctttgct tcactacctc gaacagtgat aatgaagttc catagtatga
3061 gggttttagt tatcttacct cacagtcccg acacagaccg tttagactat ccttcaatca
3121 gtttagattt tatccttata attatctcag taacaactgt tacattgtca tctcctcatt
3181 cagtcgtgat gtgataactc atcaacttat gagtttccca acgtgctttg ttccctgata
3241 tttggtttcc ctcacaggtc agttgggtga tgataggcat taaggtcacg cctactactt
3301 tgccaaaaag tagatttact ataccgcctt tacggacgca cggacaatgt ctgagggacg
3361 ccatggaaca tctaaatggt gaacagcttt catgcgtgat tgtacgttta gacccgttcc
3421 acctttttca gtcgaagcca tgagaatccg tacttcccca ctattgacct ttcgtgagag
3481 agagtttttc ttctcatcgg tattggcatc atggacaaag gcaatttctt cttttggaat
3541 ccctcgatca accagcaaag ctttcagttc gttgtagaca tcaaagcctt cttccttact
3601 tttaggtgtt ccaatatcag agaaaatcat ctgagtggct ttgtattcag ctccttcacg

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[ORF sequence]

MYLVAYQTIYANPGHMTPGVDELTIDGMSMARIDQLIDSLKDESYQPHPSRRTYIPKK

NGKPRPLGIPSFDDKLLQQVIKMILESIYEGQFESSSHGFRPNKSCHSALTQIQKTYT

GVKWFIEGDIKSFFDNINHDVIIQILRERITDERFLRLIRKFLNAGYVEDWKFYKTYS

GTPQGGIISPILANIYLDKFDKYMTDYVKNFCEGKYRKRTPEYRQNEIALGKARRTLE

CTSTENQRQEAIQRIRQLEKERVLIPHSDPMDSSFKRLTYTRYADDFICGVIGSKEDA

RRIKADIKDYLETVLKLELSEEKTLITNARDKARFLGYHLYIRQSNLAKRDSSGRLVR

NYTGRLVLEVSIETIRDRLLSYGAMKMTYHRGHEVWKPTARYFMKDCDDLEILERYNA

EIRGFYNYYCIANNSSILHRFKYIMEYSMYKTYATKYRTTKSHIIRKYKKDGQFRIQY

IGRKGDTMTRYFYNGGFKRQKKSFLENDNLPNTAKYFSRTNLIDRLKANRCEYCQATN

SLIEIHHVRKLKDLKKKTFWERLMISRQRKTIALCKDCHKKLHYGKLD

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[Secondary structure]

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