[Back to introns by organism] [Back to home page]
Information of Sr.me.I4 intron (Format of information for each intron)
[Intron and flanking sequence]
Sequence
from Genbank entry. Intron is identified in red.
The ORF
is identified in blue with start and stop codons
underlined.
5' end
1 gtacgtcatg ccaagctgat agctgcttgt gggtgcaagt cccatccggc caaagccata
61 gcgggcaagc cgggaccgag tcttgcgggc atcgcggtaa cgcggggtct gaagtgtaga
121 caggagccat gcggggtgcg ggaatgagcc tcgaaaggtg gatgttcacg gaggccgagt
181 gtgttcccta aacacgaagg caacatgagt attgtcgcta cgcgagatga tgccgctccg
241 tcggggtcga tggccggatc acgcatggaa ggtagttatc ggaacatgag aggcccgact
301 gggtccgcca gactggtctc tggcgggggt cagcaacaag gcactgccag agttgccgac
361 cgagctgagg tcgggagtcg gactggttca tagtacccat gaaaccgtcg aagaaaacga
421 gacgtgcgga gggaagggac cggcccgaga ggattccgca aggggaggcc aggatccgga
481 cgcagagccg ggttatcctg atgcccaacc tcgagcgggt gaacgcggcg gccaaacagg
541 ctgtccaaac ccggttcacc tcgctgctgc atcacgtcga tcaggctgcc cttcaccggg
601 catttagacg acagaagcgg caggcaagcg caggtgtcga tgggatgact gtggcgaagt
661 acgaagaaag actggagcaa aatctccatg atctctgcga tcgggtccac acgggtcgct
721 accggcccag ccggtgcggc gcgtttacat tcccaaagcc gatggcggaa aacggccact
781 tggagtgccc gctctggagg ataagatcgt ccagggcgcg gtcgctgaag tgctcagtgc
841 cgtctatgag gccgacttct gcgggttctc ctatggcttc aggccaggac gcaacccgca
901 catggcgctg gatgcattgc atacagcgat catgagccaa cgcgtgaact ggatgctcga
961 tgccgacatc cgcagtttct ttgactcggt tgaccacgag tggttgctgc agatggtggc
1021 gcatagaatt gccgatcccc gtatcctgca acttattaaa ctatggctgc gggccggaat
1081 tcttgagagc ggcgagacgt atgagactga cagggggact ccgcaagggg cgggcatcag
1141 tccgctcctc gccaacatct ttttgcacta catccttgat ctctgggtac atcaatggcg
1201 tcgtcgccat gcacgcggcc gtattgtgat cgtgcgctat gccgacgact tcgtcatggg
1261 cttcgagaag aaggatgatg cgcaggagat gctcttggcc ctcaaggaac ggctaggcga
1321 atttggtctg gcgctccatg aggggaagac gcggctaatc gaatttggcc ggttcgcggc
1381 cttatctcga cagcggcgtg gtgagcgaaa accagagacc ttcgccttcc tgggcttcat
1441 tcactattgt ggattgaccc gtgatggccg gttcatcgtg aagcacaaga cggaagggaa
1501 gcgcctgacg cgaaagctca aggcgttgcg cgagggagca tggcggcaca tgcacaggtc
1561 gttggctacc cagcacaagt ggcttgccgc tgtgctgcgt ggacactacg gctattacgg
1621 caggccacat aactatcccg cgctcaacgg gttctatcag caaacacgcg catatggttc
1681 cgctgcctga ggcggcgaag tcagaaaagc cggcggatga gttggttgga atttgaaatc
1741 ctgaccgcac gcttcacgct gccagtccca cacattactc gaacttgggc gcaggctcgg
1801 atatgacgcg ggttactctc gggaagagcc gggtgcggga aatccgcccg cccggatctg
1861 tgagggcgaa gccgaatggc atagctactc gac
3' end
[Intron and flanking sequence]
No flanking sequence is reported
GRESDWFIVPMKPSKKTRRAEGRDRPERIPQGEARIRTQSRVILMPNLERVNAAAKQA
VQTRFTSLLHHVDQAALHRAFRRQKRQASAGVDGMTVAKYEERLEQNLHDLCDRVHTX
GSLPAQPVRRVYIPKADGGKRPLGVPALEDKIVQGAVAEVLSAVYEADFCGFSYGFRP
GRNPHMALDALHTAIMSQRVNWMLDADIRSFFDSVDHEWLLQMVAHRIADPRILQLIK
LWLRAGILESGETYETDRGTPQGAGISPLLANIFLHYILDLWVHQWRRRHARGRIVIV
RYADDFVMGFEKKDDAQEMLLALKERLGEFGLALHEGKTRLIEFGRFAALSRQRRGER
KPETFAFLGFIHYCGLTRDGRFIVKHKTEGKRLTRKLKALREGAWRHMHRSLATQHKW
LAAVLRGHYGYYGRPHNYPALNGFYQQTRAYGSAA

| Introduction | Intron secondary structure | Intron ORF structure | Introns listed by organism | Bacterial intron fragments | Alignment of insertion sequence |
| Phylogenetic tree of intron ORFs | How to find group II intron | Site map | Contact us |