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Information of Sr.me.I4 intron   (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

 

[Intron sequence]

 

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

 

5' end

   1 gtacgtcatg ccaagctgat agctgcttgt gggtgcaagt cccatccggc caaagccata
  61 gcgggcaagc cgggaccgag tcttgcgggc atcgcggtaa cgcggggtct gaagtgtaga
 121 caggagccat gcggggtgcg ggaatgagcc tcgaaaggtg gatgttcacg gaggccgagt
 181 gtgttcccta aacacgaagg caacatgagt attgtcgcta cgcgagatga tgccgctccg
 241 tcggggtcga tggccggatc acgcatggaa ggtagttatc ggaacatgag aggcccgact
 301 gggtccgcca gactggtctc tggcgggggt cagcaacaag gcactgccag agttgccgac
 361 cgagctgagg tcgggagtcg gactggttca tagtacccat gaaaccgtcg aagaaaacga
 421 gacgtgcgga gggaagggac cggcccgaga ggattccgca aggggaggcc aggatccgga
 481 cgcagagccg ggttatcctg atgcccaacc tcgagcgggt gaacgcggcg gccaaacagg 
 541 ctgtccaaac ccggttcacc tcgctgctgc atcacgtcga tcaggctgcc cttcaccggg
 601 catttagacg acagaagcgg caggcaagcg caggtgtcga tgggatgact gtggcgaagt
 661 acgaagaaag actggagcaa aatctccatg atctctgcga tcgggtccac acgggtcgct
 721 accggcccag ccggtgcggc gcgtttacat tcccaaagcc gatggcggaa aacggccact
 781 tggagtgccc gctctggagg ataagatcgt ccagggcgcg gtcgctgaag tgctcagtgc
 841 cgtctatgag gccgacttct gcgggttctc ctatggcttc aggccaggac gcaacccgca
 901 catggcgctg gatgcattgc atacagcgat catgagccaa cgcgtgaact ggatgctcga
 961 tgccgacatc cgcagtttct ttgactcggt tgaccacgag tggttgctgc agatggtggc
1021 gcatagaatt gccgatcccc gtatcctgca acttattaaa ctatggctgc gggccggaat
1081 tcttgagagc ggcgagacgt atgagactga cagggggact ccgcaagggg cgggcatcag
1141 tccgctcctc gccaacatct ttttgcacta catccttgat ctctgggtac atcaatggcg
1201 tcgtcgccat gcacgcggcc gtattgtgat cgtgcgctat gccgacgact tcgtcatggg
1261 cttcgagaag aaggatgatg cgcaggagat gctcttggcc ctcaaggaac ggctaggcga
1321 atttggtctg gcgctccatg aggggaagac gcggctaatc gaatttggcc ggttcgcggc
1381 cttatctcga cagcggcgtg gtgagcgaaa accagagacc ttcgccttcc tgggcttcat
1441 tcactattgt ggattgaccc gtgatggccg gttcatcgtg aagcacaaga cggaagggaa
1501 gcgcctgacg cgaaagctca aggcgttgcg cgagggagca tggcggcaca tgcacaggtc
1561 gttggctacc cagcacaagt ggcttgccgc tgtgctgcgt ggacactacg gctattacgg
1621 caggccacat aactatcccg cgctcaacgg gttctatcag caaacacgcg catatggttc
1681 cgctgcctga
ggcggcgaag tcagaaaagc cggcggatga gttggttgga atttgaaatc
1741 ctgaccgcac gcttcacgct gccagtccca cacattactc gaacttgggc gcaggctcgg
1801 atatgacgcg ggttactctc gggaagagcc gggtgcggga aatccgcccg cccggatctg
1861 tgagggcgaa gccgaatggc atagctactc gac

3' end  

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[Intron and flanking sequence]

 

No flanking sequence is reported

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[ORF sequence]

 

GRESDWFIVPMKPSKKTRRAEGRDRPERIPQGEARIRTQSRVILMPNLERVNAAAKQA

VQTRFTSLLHHVDQAALHRAFRRQKRQASAGVDGMTVAKYEERLEQNLHDLCDRVHTX

GSLPAQPVRRVYIPKADGGKRPLGVPALEDKIVQGAVAEVLSAVYEADFCGFSYGFRP

GRNPHMALDALHTAIMSQRVNWMLDADIRSFFDSVDHEWLLQMVAHRIADPRILQLIK

LWLRAGILESGETYETDRGTPQGAGISPLLANIFLHYILDLWVHQWRRRHARGRIVIV

RYADDFVMGFEKKDDAQEMLLALKERLGEFGLALHEGKTRLIEFGRFAALSRQRRGER

KPETFAFLGFIHYCGLTRDGRFIVKHKTEGKRLTRKLKALREGAWRHMHRSLATQHKW

LAAVLRGHYGYYGRPHNYPALNGFYQQTRAYGSAA

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[Secondary structure]

 

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