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Information for Sy.wo.I1-1 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

                                  gtgc ggccgagcta ggctgcatca tataacgggt

20041 gggaatcccg tccggtaagg ttagccaacc gccggtaatt agtcttggag ggcagagggt
20101 aaccgctgtc tttaagcgta gacaaacaag caaacgggcc gaaagcagta gctgaaggtg
20161 ttgagccccg aaataccgaa catgggaagg cagatgctat tgcctgagca gaatgcaaca
20221 tcctggaagt cgataaggct agacgacagg acttccccgg ggtcggaggc ctcggcacgt
20281 ttgacatcgt tatgatgtag taactcggga gatcctattt tctcttctcc agccacggag
20341 gagtatgacc gacaagtgat aataagcgag ggagtcaaat gggaaatagg aagtcggatc
20401 attgcgtaat actgatgata acgggtaatg ccggaggagg gaaggcaatg acacaatgga
20461 gcccttacag gggacacatt taccacaccg gaggtggaga caaagttaaa tggaaacagg
20521 acttgtaagg atagcagaga tagctagaca gaacccgaaa gaacgattca cagccttgat
20581 acatcatatc aatcatgaaa cactgaaaga gtgtcatcta gagatcagtg gatcaaaggc
20641 aagtggagta gatcaggtga caaaacaagc gtacgaggaa aatcttgaag ccaacatagc
20701 agacctgatc ggaagaatga agcggcaggc gtataaaccc cagccagtgc gaagggtata
20761 tatccctaaa gaaggcagca acaaaaggcg gcccctggga atacctagtt atgaggataa
20821 actagtgcag aaaggacttg caaggatact caatacaatc tatgagcaag attttctgga
20881 ctgttccttt ggattcagac ctggcagagg ctgtcacgat gcattaaagg tactaaatca
20941 catcattgag agaaagaaag taaactatat agtcgatgca gacatccgcg gcttcttcga
21001 tcacgtcgat catgaatgga tgatgaaatt cttagaattg cgcatagctg accctaattt
21061 actgcgcctg attaaaaggt ttcttaaagc aggggtaatg gaagcaggaa tcgtgtacga
21121 cacacctaaa ggaacaccac agggtggtat agtatcacca atacttgcga atatatattt
21181 acattatgtg ctggatctat ggtttgaaaa ggtagtaaag aaaaggtgtc aaggtgaagc
21241 atacttggta agatatgccg atgattttgt gtgctgtttt cagaacaaaa gcgatgcgga
21301 atggttctat gcgaacctgc gggaaagact gaacaagttc aatctggaag tagcagagga
21361 gaaaacccgt attatagctt ttgggcgctt tgcagataaa gagagtaaaa agcaaggaag
21421 gaagaaacca gatacatttg atttcctggg gtttactcac tactgcagta aaagcaagaa
21481 aggctggttt cgggtaaaac ggaaaacaag ccaaaagaaa tatcgaagca gtctgcttaa
21541 atgcaaaaca tggcttagga agcacctaat ttcacccacg gattatgtaa tagagatgtt
21601 acaaattaaa ctgcagggat actacagata ttacggaata acagataact ccacggcatt
21661 aagaaacttt tgtgacaaag tacgaagaat gttattcaaa tggttcaacc gccgtagcca
21721 gcgcaaaagc atgaactggg ataaatatgt acgctttctt aataaacacc cgttaccaaa
21781 gggaagaatt tatgtagata tatatgacgt aaggcccgag ctgctgagtt atctaaagtg
21841 aatgacattg tgaggagccg tgtgcgttaa ttgcgcaagc acggttctgt gaggagcata
21901 atgccaatca gccatggagc aaatattgtg acactctcag aggaaacgga gagcaacaga
21961 ttaacacaaa gcgtctccta aagctgaaag gcatatgttt actcgac

3' end

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[Intron and flanking sequence]

19621 atgaggtgat atatatgagt gatgaattaa ttcttgaaaa gtttggtagt aagggtggag
19681 attacttcga gatgattgtt gcgagttccc ggaggtattg aagcaatctg gccagggagg
19741 ccagttgacg gtcgtccggt tcgctctcca tgaaatttcc actcaggcat atcccgatgc
19801 tgtcgccgtt gccctgggga ccgcatgggc gccgattgtg tccagggggc ggccttcttc
19861 tatatttccg ttctgtcgga ttacgaaatg gtagccgatg tcgttgatgt tgaaagaatc
19921 ctttacgcaa gatgtgattg gcatcatatc ctgtgacgtg tgacggctaa cagaaggacg
19981 tcagactgta tttgtggtgc caggcagtgc ggccgagcta ggctgcatca tataacgggt
20041 gggaatcccg tccggtaagg ttagccaacc gccggtaatt agtcttggag ggcagagggt
20101 aaccgctgtc tttaagcgta gacaaacaag caaacgggcc gaaagcagta gctgaaggtg
20161 ttgagccccg aaataccgaa catgggaagg cagatgctat tgcctgagca gaatgcaaca
20221 tcctggaagt cgataaggct agacgacagg acttccccgg ggtcggaggc ctcggcacgt
20281 ttgacatcgt tatgatgtag taactcggga gatcctattt tctcttctcc agccacggag
20341 gagtatgacc gacaagtgat aataagcgag ggagtcaaat gggaaatagg aagtcggatc
20401 attgcgtaat actgatgata acgggtaatg ccggaggagg gaaggcaatg acacaatgga
20461 gcccttacag gggacacatt taccacaccg gaggtggaga caaagttaaa tggaaacagg
20521 acttgtaagg atagcagaga tagctagaca gaacccgaaa gaacgattca cagccttgat
20581 acatcatatc aatcatgaaa cactgaaaga gtgtcatcta gagatcagtg gatcaaaggc
20641 aagtggagta gatcaggtga caaaacaagc gtacgaggaa aatcttgaag ccaacatagc
20701 agacctgatc ggaagaatga agcggcaggc gtataaaccc cagccagtgc gaagggtata
20761 tatccctaaa gaaggcagca acaaaaggcg gcccctggga atacctagtt atgaggataa
20821 actagtgcag aaaggacttg caaggatact caatacaatc tatgagcaag attttctgga
20881 ctgttccttt ggattcagac ctggcagagg ctgtcacgat gcattaaagg tactaaatca
20941 catcattgag agaaagaaag taaactatat agtcgatgca gacatccgcg gcttcttcga
21001 tcacgtcgat catgaatgga tgatgaaatt cttagaattg cgcatagctg accctaattt
21061 actgcgcctg attaaaaggt ttcttaaagc aggggtaatg gaagcaggaa tcgtgtacga
21121 cacacctaaa ggaacaccac agggtggtat agtatcacca atacttgcga atatatattt
21181 acattatgtg ctggatctat ggtttgaaaa ggtagtaaag aaaaggtgtc aaggtgaagc
21241 atacttggta agatatgccg atgattttgt gtgctgtttt cagaacaaaa gcgatgcgga
21301 atggttctat gcgaacctgc gggaaagact gaacaagttc aatctggaag tagcagagga
21361 gaaaacccgt attatagctt ttgggcgctt tgcagataaa gagagtaaaa agcaaggaag
21421 gaagaaacca gatacatttg atttcctggg gtttactcac tactgcagta aaagcaagaa
21481 aggctggttt cgggtaaaac ggaaaacaag ccaaaagaaa tatcgaagca gtctgcttaa
21541 atgcaaaaca tggcttagga agcacctaat ttcacccacg gattatgtaa tagagatgtt
21601 acaaattaaa ctgcagggat actacagata ttacggaata acagataact ccacggcatt
21661 aagaaacttt tgtgacaaag tacgaagaat gttattcaaa tggttcaacc gccgtagcca
21721 gcgcaaaagc atgaactggg ataaatatgt acgctttctt aataaacacc cgttaccaaa
21781 gggaagaatt tatgtagata tatatgacgt aaggcccgag ctgctgagtt atctaaagtg
21841 aatgacattg tgaggagccg tgtgcgttaa ttgcgcaagc acggttctgt gaggagcata
21901 atgccaatca gccatggagc aaatattgtg acactctcag aggaaacgga gagcaacaga
21961 ttaacacaaa gcgtctccta aagctgaaag gcatatgttt actcgacctt aagttgttaa
22021 gttattgccg ggtatggggg gataaattta gcaagttaat aatgaaaaaa tactttttca
22081 ttactatttg tgttgatagt ggtagcggcg taataaaggt tattatgcaa tgcagttttt
22141 gcaggcagga ggaattaagc aatgaaagcc ataattgaac gctttgaagg ggattttgct
22201 cttctggaaa taaggggtaa gggccaggtt ataaaggtca aacgggctaa acttccgcct
22261 gcagcccggg aaggcgatgt agtgttttgc cagggcgaag ggtggcttat tgatcaaaaa
22321 gtcaccgcaa cactcaagaa agaagtggag gacctggcca ccgaattgtg gcaggattga
22381 attttttccg ggatttcccc ctcgggaaaa ggatgaatag taaagcgaaa aaaaagattt

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[ORF sequence]

METGLVRIAEIARQNPKERFTALIHHINHETLKECHLEISGSKASGVDQVTKQAYEEN

LEANIADLIGRMKRQAYKPQPVRRVYIPKEGSNKRRPLGIPSYEDKLVQKGLARILNT

IYEQDFLDCSFGFRPGRGCHDALKVLNHIIERKKVNYIVDADIRGFFDHVDHEWMMKF

LELRIADPNLLRLIKRFLKAGVMEAGIVYDTPKGTPQGGIVSPILANIYLHYVLDLWF

EKVVKKRCQGEAYLVRYADDFVCCFQNKSDAEWFYANLRERLNKFNLEVAEEKTRIIA

FGRFADKESKKQGRKKPDTFDFLGFTHYCSKSKKGWFRVKRKTSQKKYRSSLLKCKTW

LRKHLISPTDYVIEMLQIKLQGYYRYYGITDNSTALRNFCDKVRRMLFKWFNRRSQRK

SMNWDKYVRFLNKHPLPKGRIYVDIYDVRPELLSYLK

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[Secondary structure]

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