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Information of Th.e.I11-1 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

Note: Multiple Insertions
Th.e.I11-1    BA000039 (1683646-1684491)
Th.e.I11-2    BA000039 (2564637-2565481)

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

            gtgcg acacgaagtc gtttagatga ttgtcccact agcccaacaa gctagaacgg
183301 gaccggttgt gcccccaacc gtagcctagg gaggcatgcg tgactggtaa cggtcaggta
183361 tgaagccctc ccgacaacgg agcccgaacc gaaaggttgg agctgaatcc gcgaggagga
183421 agcaactttg ccagcgtcag gcgataggga gctaggcttg agggtatggt gagcacatgc
183481 gaagtgatgc cagaagcctc gtgatcttag acaggccaaa gacgctgata ggcctgggcc
183541 aaaatggcaa acggacagga ctcactgttt gttcttcagt gagcggggac gatagctccg
183601 tcggggcaga gtcaccacct aacccctcat atgtcatcta aacggaacgt ggtaagcccg
183661 tactttcgcc ttgataggct aagaacaagg caagtggact gcgaggaaca accatggaag
183721 tgcgggtaaa ggaggtggga aaaagcgaat gccaatctgt aatgggttgg atagggattg
183781 aggatggtgg caggacatcc aacatcatcc cactcgaaag agggcagact tcccactggt
183841 cccccgttac gagaaaactc acagaacctc cctaatggtg acaaagcaaa tggcggtgat
183901 cttgagtcac tggtgcggtc accaaccttc caccaaaggt agagaggctg tagatgagta
183961 tcgtaaaggt tgcatgcaca accagttcct cttaaatgag gggtcctggg gggctcgagc
184021 cggatgcagg gaaacttgca cgtccggttc ctagggggct agggggcagc aatccccccc
184081 tgctacccga c

3' end  

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[Intron and flanking sequence]

182761 aagacccgcc gatcctgatc ccccagcttt ttccacatcc gctgcaacac attcaagaag
182821 atctccattt ccagttcagg cacggtccaa ctgggggaaa acttaatttt taagtaacga
182881 cagacccgca tcaatgtttg ccgatagctg atttgctggg ctttgccctt aagcaccgtc
182941 aaaccatcgg ctgccaaaaa gcgaaaccgc tcttcaatgt catctaacca ggcttgacga
183001 tcttgggctt gtaccgcaat cggatccggc gtggttagat agtccaaggg attgagccga
183061 cgacgaaaca gaatttctgt taggtcttgc aactcctcct ctgtcgccaa ttccagcgca
183121 gcccgtagct cgttcatggg gttcttgctc cagcagcagc acaatagaat aggatgattc
183181 ttcacccctg attatagaga ttcaggctaa attgtggtac agcccttctg actaagaatg
183241 gaacagtgcg acacgaagtc gtttagatga ttgtcccact agcccaacaa gctagaacgg
183301 gaccggttgt gcccccaacc gtagcctagg gaggcatgcg tgactggtaa cggtcaggta
183361 tgaagccctc ccgacaacgg agcccgaacc gaaaggttgg agctgaatcc gcgaggagga
183421 agcaactttg ccagcgtcag gcgataggga gctaggcttg agggtatggt gagcacatgc
183481 gaagtgatgc cagaagcctc gtgatcttag acaggccaaa gacgctgata ggcctgggcc
183541 aaaatggcaa acggacagga ctcactgttt gttcttcagt gagcggggac gatagctccg
183601 tcggggcaga gtcaccacct aacccctcat atgtcatcta aacggaacgt ggtaagcccg
183661 tactttcgcc ttgataggct aagaacaagg caagtggact gcgaggaaca accatggaag
183721 tgcgggtaaa ggaggtggga aaaagcgaat gccaatctgt aatgggttgg atagggattg
183781 aggatggtgg caggacatcc aacatcatcc cactcgaaag agggcagact tcccactggt
183841 cccccgttac gagaaaactc acagaacctc cctaatggtg acaaagcaaa tggcggtgat
183901 cttgagtcac tggtgcggtc accaaccttc caccaaaggt agagaggctg tagatgagta
183961 tcgtaaaggt tgcatgcaca accagttcct cttaaatgag gggtcctggg gggctcgagc
184021 cggatgcagg gaaacttgca cgtccggttc ctagggggct agggggcagc aatccccccc
184081 tgctacccga ccactccccc attccagaaa agcggggttc ggacagtaca atacaaaaga
184141 gtagcaggct ggcaatagga aaacctatgg atttattgac cctagaaggt tggctggata
184201 ataccgcctt tgccgtactt tttctcacca tgttgctcta ctggtgtggg gcagcatttc
184261 cccagtggcc gctgctgacc gccgccggtc gcacggggat ggcgatcgcc aacctctgta
184321 ttactggctt gctggcggcg cgctggattg aggggggcta ctttcccatc agtaatctct
184381 atgaatccct ctttttcctg tgttggggac tgacggccat gcactttgtc gccgagtcca

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[ORF sequence]

This intron is ORF-less.

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[Secondary structure]

Essentially the same as Th.e.I1, please see the structure of Th.e.I1.

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